| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_204440g0010 |
| Family | PL1 |
| Protein Properties | Length: 441 Molecular Weight: 49551.2 Isoelectric Point: 8.7778 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 220 | 295 | 7.1e-24 |
| NAMVMLMGHNDTYADDVIMKVTVAFNHFGKGLNERMPRCRYGHFHIVNNDYTQWEDYAIGGSANPTILSQGNRFLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 441 Download |
| MSSHISIVAC MLLLGILCCI HGETPKPFGS EPGETIMGQT IMTPSNISSF DFPVGKVADR 60 VPQTVHKRRS MHNSTKRGRE LGGIFSCATG NPIDDCWRCD PNWRRNRKRL ADCGIGFGKD 120 AIGGKNGKFY VVTDPRDDPV NPWKGTLRYG VIQTEPLWII FKRDMVIRLK EELIMNSFKT 180 IDGRGVNVHI GQGGPCITIQ NVTNIIIHGI HIDDCRPAGN AMVMLMGHND TYADDVIMKV 240 TVAFNHFGKG LNERMPRCRY GHFHIVNNDY TQWEDYAIGG SANPTILSQG NRFLASANPF 300 KKEVTRRENN AVQDNEWKNW NWISEDDLFL GGSANPTILS QGNRFLASAN PFKKEVTRRE 360 NNAVQDNEWK KWNWISEDDL FLNGAYFVQS GSQLSSAYAT AYSMAPRSSA LVQDLTRDAG 420 VLSCRNGSPC QHRPRHHKHR I |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 2.0e-7 | 210 | 299 | 93 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 2.0e-29 | 170 | 293 | 201 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 5.0e-35 | 164 | 296 | 192 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK66161.1 | 0 | 70 | 430 | 1 | 368 | pectate lyase [Fragaria x ananassa] |
| GenBank | ABR17766.1 | 0 | 6 | 430 | 5 | 426 | unknown [Picea sitchensis] |
| DDBJ | BAF43573.1 | 0 | 70 | 430 | 58 | 425 | pectate lyase [Prunus persica] |
| EMBL | CBI33346.1 | 0 | 70 | 430 | 63 | 430 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002297822.1 | 0 | 9 | 430 | 8 | 450 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 91 | 423 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 91 | 423 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1jta_A | 0.0002 | 223 | 293 | 209 | 287 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1jrg_B | 0.0002 | 223 | 293 | 209 | 287 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
| PDB | 1jrg_A | 0.0002 | 223 | 293 | 209 | 287 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
| Signal Peptide | ||||
|---|---|---|---|---|
 | ||||
| Cleavage Site | ||||
| 0 | ||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO778688 | 427 | 70 | 432 | 0 |
| GW772379 | 224 | 1 | 223 | 0 |
| HO772321 | 293 | 83 | 311 | 0 |
| FG606120 | 350 | 69 | 399 | 0 |
| HO772321 | 141 | 223 | 363 | 1e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |