| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_21072g0010 |
| Family | GH28 |
| Protein Properties | Length: 671 Molecular Weight: 72356.1 Isoelectric Point: 8.4096 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 84 | 403 | 0 |
| TGACTSTSPSVFVVPQGKKYLVNPIDFKGPCRAPGTVVAPRDPWNPQDQNSWLQFSYLQGITIQGGGIVDGSGQKWWAYSCRNYQSQAMLFSFCEDVTLR DLTFQNSPGVHIKLFASINVEVGNLQISSPEDSPNTDGINIASSQHVVIRSSTIGTGDDCVSIITGSSNIQINDIVCGPGHGISIGSLGKDNARDTVANV VVRGAYLTGTTNGLRIKTWQGGSGYAQNISFQNVKMNNVSNPIIIDQYYCGSSSGCRNQTSAVQVSSVSYTGISGTSATPEAIRLACSSTVPCTNIVMED VNIRMIEGFPSTSFVDNVKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 671 Download |
| MVSVVAENLR LLVLICIVSL LHGSASSQNT EPRQKSSLDS DRRRVRKLLD QNYLHRDSVF 60 NVDMYGASGN GWSDDSKAFW AAWTGACTST SPSVFVVPQG KKYLVNPIDF KGPCRAPGTV 120 VAPRDPWNPQ DQNSWLQFSY LQGITIQGGG IVDGSGQKWW AYSCRNYQSQ AMLFSFCEDV 180 TLRDLTFQNS PGVHIKLFAS INVEVGNLQI SSPEDSPNTD GINIASSQHV VIRSSTIGTG 240 DDCVSIITGS SNIQINDIVC GPGHGISIGS LGKDNARDTV ANVVVRGAYL TGTTNGLRIK 300 TWQGGSGYAQ NISFQNVKMN NVSNPIIIDQ YYCGSSSGCR NQTSAVQVSS VSYTGISGTS 360 ATPEAIRLAC SSTVPCTNIV MEDVNIRMIE GFPSTSFVDN VKGALPSGHP PGVMEAFGPR 420 SLRLCGPNFS VATLVPRLLL LGLLLIGLPL VQGDEHLVTQ RATAGVKRLC CPGSVGGTRG 480 RPCPNTGRIS GSAPVQSMFS THILGQHWNP LEIGVVIANF DWLLDHPSEI GCREAGLEAT 540 EWPEIWEGPK GLGVKQMSNW LKVLGCCSVR PLSSPSPPFC WEGTQEGVGE MREFESTTPG 600 RRTRWPKRRR IKGREQEGDA GPCEVGLAGK LVDLCTSFVV KGIFGTVGER KRGKNRARQD 660 KFRAGKGWAG S 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03010 | PLN03010 | 1.0e-90 | 60 | 403 | 354 | + polygalacturonase | ||
| PLN02188 | PLN02188 | 1.0e-92 | 55 | 402 | 361 | + polygalacturonase/glycoside hydrolase family protein | ||
| pfam00295 | Glyco_hydro_28 | 6.0e-95 | 87 | 402 | 327 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02218 | PLN02218 | 2.0e-104 | 11 | 387 | 399 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 4.0e-126 | 59 | 411 | 370 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC98004.1 | 0 | 58 | 391 | 64 | 409 | Similar to gb |
| GenBank | ABK23977.1 | 0 | 1 | 404 | 1 | 424 | unknown [Picea sitchensis] |
| GenBank | ABK26513.1 | 0 | 1 | 404 | 1 | 413 | unknown [Picea sitchensis] |
| GenBank | ABR18059.1 | 0 | 52 | 403 | 80 | 446 | unknown [Picea sitchensis] |
| GenBank | ACN40008.1 | 0 | 1 | 404 | 1 | 424 | unknown [Picea sitchensis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nhc_F | 2e-21 | 144 | 359 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_E | 2e-21 | 144 | 359 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_D | 2e-21 | 144 | 359 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_C | 2e-21 | 144 | 359 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_B | 2e-21 | 144 | 359 | 72 | 291 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
