Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_224992g0010 |
Family | GH19 |
Protein Properties | Length: 167 Molecular Weight: 18469.8 Isoelectric Point: 5.9716 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 9 | 151 | 0 |
DQNYLFPCSPGASYHGRGALPLYWNYNYGQIGEALKLDLLNYPDLLSNNATIGFQTTIWRWMNPIKPKQPSAHDVLVGNWKPTKNDTASFRFPGFGMTIN VLNGGLECGQGDIEAMSNKVSHYLHFLDLIGVGRELAGDHLDC |
Full Sequence |
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Protein Sequence Length: 167 Download |
MSLDQLYSDQ NYLFPCSPGA SYHGRGALPL YWNYNYGQIG EALKLDLLNY PDLLSNNATI 60 GFQTTIWRWM NPIKPKQPSA HDVLVGNWKP TKNDTASFRF PGFGMTINVL NGGLECGQGD 120 IEAMSNKVSH YLHFLDLIGV GRELAGDHLD CGEQVALNSL SNSATSR |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam00182 | Glyco_hydro_19 | 2.0e-41 | 7 | 151 | 145 | + Chitinase class I. |
cd00325 | chitinase_glyco_hydro_19 | 2.0e-53 | 15 | 151 | 137 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ84319.1 | 0 | 1 | 166 | 68 | 237 | fiber glycosyl hydrolase family 19 protein [Gossypium barbadense] |
GenBank | ABK23415.1 | 0 | 1 | 167 | 134 | 300 | unknown [Picea sitchensis] |
GenBank | ACN39823.1 | 0 | 1 | 167 | 134 | 300 | unknown [Picea sitchensis] |
GenBank | ADC55619.1 | 0 | 1 | 166 | 169 | 334 | class I chitinase [Elaeis guineensis] |
DDBJ | BAI63079.1 | 0 | 1 | 166 | 140 | 305 | putative chitinase [Epipremnum aureum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3cql_B | 9.80909e-45 | 7 | 154 | 96 | 239 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 3cql_A | 9.80909e-45 | 7 | 154 | 96 | 239 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 2baa_A | 6.99949e-42 | 7 | 154 | 96 | 239 | A Chain A, The Refined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution |
PDB | 1cns_B | 4.00001e-41 | 7 | 154 | 96 | 239 | A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution |
PDB | 1cns_A | 4.00001e-41 | 7 | 154 | 96 | 239 | A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV986149 | 167 | 1 | 167 | 0 |
DV977501 | 167 | 1 | 167 | 0 |
CK437580 | 164 | 4 | 167 | 0 |
ES865673 | 167 | 1 | 167 | 0 |
DV982620 | 167 | 1 | 167 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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