| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_228746g0010 |
| Family | CBM43 |
| Protein Properties | Length: 370 Molecular Weight: 40883.7 Isoelectric Point: 7.0598 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 274 | 356 | 3.2e-28 |
| WCVVDANADVSALPSAIKSACSQGDNTCAAIQPGKPCHQPNTVTDHASYAFNSYWQKSKNFYGGCDFNKTARLVTKDPSSGTC | |||
| GH17 | 15 | 193 | 0 |
| IGVAYGQQGDKLPSVQESINLIQRMKAGRVKIYGANPEILKALSHTGMEVIVSVLNEDLANVAASQSFADKWVNKNVADFYPAAKINTILVGNEVLTDYS NKQAWYQLVPAMRSIWRALLKYKLDHIKVGTPLAMDMLAPSVPQSAFPPSSGVFRDDIAETVMKPMLEFLNETGSYFFM | |||
| Full Sequence |
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| Protein Sequence Length: 370 Download |
| MGSLSFPVDA EEYTIGVAYG QQGDKLPSVQ ESINLIQRMK AGRVKIYGAN PEILKALSHT 60 GMEVIVSVLN EDLANVAASQ SFADKWVNKN VADFYPAAKI NTILVGNEVL TDYSNKQAWY 120 QLVPAMRSIW RALLKYKLDH IKVGTPLAMD MLAPSVPQSA FPPSSGVFRD DIAETVMKPM 180 LEFLNETGSY FFMHLRMLAN PPLGTPRRPN QFIPTNIFAL FDENQKPGPE TERHWGFAYP 240 NGSLMYEIDL TGKLKDSDYK PLPPAPPPYK GKLWCVVDAN ADVSALPSAI KSACSQGDNT 300 CAAIQPGKPC HQPNTVTDHA SYAFNSYWQK SKNFYGGCDF NKTARLVTKD PSSGTCTYPF 360 EDCVQKSVLC |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-14 | 204 | 249 | 46 | + Glycosyl hydrolases family 17. | ||
| pfam07983 | X8 | 2.0e-15 | 273 | 344 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-33 | 273 | 358 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-43 | 15 | 192 | 179 | + Glycosyl hydrolases family 17. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN60692.1 | 0 | 15 | 201 | 23 | 210 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI39414.1 | 0 | 56 | 359 | 25 | 371 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283660.1 | 0 | 10 | 358 | 23 | 404 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002298669.1 | 0 | 15 | 241 | 23 | 237 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002298669.1 | 0 | 196 | 359 | 293 | 458 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 6e-25 | 15 | 189 | 2 | 171 | A Chain A, Cellulase Cel5 From Erwinia Chrysanthemi, A Family Gh 5-2 Enzyme |
| PDB | 3f55_D | 0.000003 | 204 | 251 | 270 | 316 | A Chain A, Cellulase Cel5 From Erwinia Chrysanthemi, A Family Gh 5-2 Enzyme |
| PDB | 3f55_C | 6e-25 | 15 | 189 | 2 | 171 | A Chain A, Cellulase Cel5 From Erwinia Chrysanthemi, A Family Gh 5-2 Enzyme |
| PDB | 3f55_C | 0.000003 | 204 | 251 | 270 | 316 | A Chain A, Cellulase Cel5 From Erwinia Chrysanthemi, A Family Gh 5-2 Enzyme |
| PDB | 3f55_B | 6e-25 | 15 | 189 | 2 | 171 | A Chain A, Cellulase Cel5 From Erwinia Chrysanthemi, A Family Gh 5-2 Enzyme |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DV975385 | 175 | 196 | 370 | 0 |
| DV995183 | 175 | 196 | 370 | 0 |
| GE476030 | 175 | 196 | 370 | 0 |
| GE475971 | 175 | 196 | 370 | 0 |
| CO481041 | 175 | 196 | 370 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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