PlantCAZyme

CAZyme Information

Basic Information
Species	Picea abies
Cazyme ID	MA_242814g0010
Family	AA3
Protein Properties	Length: 308 Molecular Weight: 33145.8 Isoelectric Point: 6.6991
View CDS

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
AA3	28	296	4.2e-28
ILVEANATVVACGALMTPGLLRASGLKNPNIGRNLHLHPVRMAWGYFPPDVEPEGNCYEGGIITAMCKEGAKWDGSGYGTIIQTPALAPGSFGAIMPWVS GADMKERMIKYQRTAHVFALTRDRGSGSVGRDMDVNYNLMDSCDKENLDDGLLRALRILIAAGATEVGTHHNDGRVLKIEGSSETTEIEKYVNDVRDNRG WCPLISAHQMGSCRMGVDPATSCVDENGKTWEVEGLFVSDASVFPTALGVNPMITVEAIALCISRRVSE

Full Sequence
Protein Sequence Length: 308 Download
MKNHGDHCKR PKKAVGVLCR AGGQGEAILV EANATVVACG ALMTPGLLRA SGLKNPNIGR 60 NLHLHPVRMA WGYFPPDVEP EGNCYEGGII TAMCKEGAKW DGSGYGTIIQ TPALAPGSFG 120 AIMPWVSGAD MKERMIKYQR TAHVFALTRD RGSGSVGRDM DVNYNLMDSC DKENLDDGLL 180 RALRILIAAG ATEVGTHHND GRVLKIEGSS ETTEIEKYVN DVRDNRGWCP LISAHQMGSC 240 RMGVDPATSC VDENGKTWEV EGLFVSDASV FPTALGVNPM ITVEAIALCI SRRVSEFLQQ 300 NKPPSSTS

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
COG2303	BetA	0.003	11	77	84	+ Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
TIGR02462	pyranose_ox	1.0e-6	230	301	72	+ pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation.
pfam00732	GMC_oxred_N	1.0e-14	10	67	61	+ GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
COG2303	BetA	2.0e-17	233	306	74	+ Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
pfam05199	GMC_oxred_C	2.0e-22	233	290	58	+ GMC oxidoreductase. This domain found associated with pfam00732.

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	ABR17814.1	0	12	307	445	740	unknown [Picea sitchensis]
RefSeq	XP_002269629.1	0	23	308	498	793	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002314488.1	0	2	298	412	713	predicted protein [Populus trichocarpa]
RefSeq	XP_002328753.1	0	23	302	458	745	predicted protein [Populus trichocarpa]
RefSeq	XP_002519938.1	0	12	302	415	709	electron carrier, putative [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	3ljp_B	0.0002	29	308	259	536	A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant
PDB	3ljp_A	0.0002	29	308	259	536	A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant
PDB	3nne_H	0.0004	29	308	259	536	A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant
PDB	3nne_G	0.0004	29	308	259	536	A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant
PDB	3nne_F	0.0004	29	308	259	536	A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

FD737259

213

304

DR120107

217

278

DR579343

184

121

304

EX377824

277

280

DR576112

253

307

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_089_00009.1	Aquca_049_00132.1	Aquca_034_00307.1	Aquca_034_00304.1
Arabidopsis lyrata	914728	491906	479855	470376
Arabidopsis thaliana	AT4G19380.1	AT4G28570.1	AT3G23410.1	AT1G03990.1
Brachypodium distachyon	Bradi3g28677.1	Bradi3g28657.1	Bradi3g49085.1
Brassica rapa	Bra012548	Bra024190	Bra013391	Bra015283	Bra001912
	Bra014947
Carica papaya	evm.model.supercontig_165.33	evm.model.supercontig_44.31	evm.model.supercontig_2124.1
Capsella rubella	Carubv10004418m	Carubv10004208m	Carubv10012453m	Carubv10004212m	Carubv10013046m
Citrus clementina	Ciclev10011111m	Ciclev10004403m	Ciclev10004405m	Ciclev10018992m
Citrus sinensis	orange1.1g003990m	orange1.1g004496m
Cucumis sativus	Cucsa.037200.2	Cucsa.037200.1	Cucsa.035240.1	Cucsa.255570.1
Eucalyptus grandis	Eucgr.H03017.2	Eucgr.H03017.1	Eucgr.H00753.1	Eucgr.K02114.1	Eucgr.D02566.1
	Eucgr.D02568.1
Fragaria vesca	mrna08288.1-v1.0-hybrid	mrna11513.1-v1.0-hybrid	mrna08285.1-v1.0-hybrid
Glycine max	Glyma09g35210.2	Glyma01g35620.1	Glyma16g16415.1	Glyma16g08300.2	Glyma10g32640.2
	Glyma12g15940.1	Glyma19g34960.1	Glyma06g42400.2	Glyma03g32220.2
Gossypium raimondii	Gorai.001G179800.3	Gorai.001G179800.2	Gorai.001G179800.1	Gorai.011G177100.3	Gorai.011G177100.2
	Gorai.011G177100.1	Gorai.006G252500.1
Linum usitatissimum	Lus10003621	Lus10024922	Lus10035673	Lus10008239	Lus10022903
	Lus10037257	Lus10011800
Malus domestica	MDP0000233110	MDP0000173300	MDP0000208936	MDP0000197715
Manihot esculenta	cassava4.1_004067m	cassava4.1_002349m	cassava4.1_002619m	cassava4.1_002379m	cassava4.1_025870m
Medicago truncatula	Medtr5g025650.1	Medtr8g072210.1	Medtr4g081080.1	Medtr1g075650.1	Medtr4g080890.1
Mimulus guttatus	mgv1a001761m	mgv1a022390m	mgv1a001868m	mgv1a001883m	mgv1a001896m
Oryza sativa	LOC_Os10g33540.1	LOC_Os10g33520.1	LOC_Os10g33460.1	LOC_Os02g40840.1
Panicum virgatum	Pavirv00054947m
Physcomitrella patens	Pp1s58_61V6.1	Pp1s7_216V6.1	Pp1s48_250V6.1	Pp1s2_413V6.1
Phaseolus vulgaris	Phvul.002G122600.1	Phvul.003G278200.1	Phvul.007G124200.1	Phvul.001G162800.1	Phvul.011G136600.1
Picea abies	MA_10427118g0010	MA_9032943g0010	MA_9483g0010	MA_10427421g0010
Populus trichocarpa	Potri.004G234900.2	Potri.004G234900.1	Potri.010G069100.1	Potri.008G169300.1	Potri.002G259700.1
Prunus persica	ppa014756m	ppa018458m	ppa021498m
Ricinus communis	29827.m002655	29981.m000586	28492.m000467
Setaria italica	Si034362m	Si034354m	Si034359m	Si016380m
Selaginella moellendorffii	114089	116855	74601	73531
Sorghum bicolor	Sb01g019470.1	Sb01g019460.1	Sb01g019480.1	Sb04g026370.1	Sb04g026390.1
Thellungiella halophila	Thhalv10024717m	Thhalv10024496m	Thhalv10024528m	Thhalv10020141m	Thhalv10006882m
Vitis vinifera	GSVIVT01036891001	GSVIVT01027855001	GSVIVT01028371001

Orthologous Group

Species

Aquilegia coerulea

Arabidopsis lyrata