| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_285723g0010 |
| Family | GH28 |
| Protein Properties | Length: 332 Molecular Weight: 35481.2 Isoelectric Point: 6.1153 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 4 | 328 | 0 |
| SNAVLQVPSGKRFLVKPVTFLGPCKSHISVEITGTIVAPKEPSAWNNNELDLWLRFSGISGLTIEGGGVIDGQGQGLLGWRSAGLFPACKLRLITLFLCL NKDAMSITGCSNVLIRNLQFVNSQQMHLVVVDSSEIQISGLQIQAPEESPNTDGIHIQRVQNAQIDDCVIRTGDDCISISSGSSTINVKDINCGPGHGIS IGSLGKNGEGAKIDDILVQNITFTETSNGARIKTWQGGSGYARNIRFEDIVVDNVKNPIIIDQYYCDSNSPCKTQQSAVQIQDVTYRNIQGTSSTDVAVN FSCSETVACTGITLTNVKITTATAN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 332 Download |
| MASSNAVLQV PSGKRFLVKP VTFLGPCKSH ISVEITGTIV APKEPSAWNN NELDLWLRFS 60 GISGLTIEGG GVIDGQGQGL LGWRSAGLFP ACKLRLITLF LCLNKDAMSI TGCSNVLIRN 120 LQFVNSQQMH LVVVDSSEIQ ISGLQIQAPE ESPNTDGIHI QRVQNAQIDD CVIRTGDDCI 180 SISSGSSTIN VKDINCGPGH GISIGSLGKN GEGAKIDDIL VQNITFTETS NGARIKTWQG 240 GSGYARNIRF EDIVVDNVKN PIIIDQYYCD SNSPCKTQQS AVQIQDVTYR NIQGTSSTDV 300 AVNFSCSETV ACTGITLTNV KITTATANKA KS 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00295 | Glyco_hydro_28 | 7.0e-73 | 6 | 323 | 319 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN03003 | PLN03003 | 2.0e-76 | 2 | 331 | 333 | + Probable polygalacturonase At3g15720 | ||
| PLN02218 | PLN02218 | 3.0e-79 | 3 | 327 | 327 | + polygalacturonase ADPG | ||
| PLN03010 | PLN03010 | 8.0e-80 | 8 | 331 | 325 | + polygalacturonase | ||
| PLN02793 | PLN02793 | 6.0e-96 | 10 | 332 | 324 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC57273.1 | 0 | 2 | 323 | 82 | 395 | putative polygalacturonase PG1 [Oryza sativa Japonica Group] |
| DDBJ | BAC57279.1 | 0 | 6 | 323 | 86 | 395 | putative polygalacturonase PG1 [Oryza sativa Japonica Group] |
| GenBank | EAZ03178.1 | 0 | 6 | 322 | 86 | 389 | hypothetical protein OsI_25331 [Oryza sativa Indica Group] |
| GenBank | EAZ39077.1 | 0 | 2 | 323 | 82 | 395 | hypothetical protein OsJ_23509 [Oryza sativa Japonica Group] |
| GenBank | EEC81719.1 | 0 | 6 | 323 | 86 | 395 | hypothetical protein OsI_25337 [Oryza sativa Indica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 2e-21 | 67 | 324 | 113 | 363 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1rmg_A | 0.00000000000001 | 29 | 324 | 25 | 340 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| PDB | 1hg8_A | 0.00000000000005 | 63 | 323 | 69 | 332 | A Chain A, Endopolygalacturonase From The Phytopathogenic Fungus Fusarium Moniliforme |
| PDB | 1nhc_F | 0.0000000000002 | 57 | 323 | 63 | 319 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_E | 0.0000000000002 | 57 | 323 | 63 | 319 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO979919 | 212 | 113 | 324 | 0 |
| EH767961 | 226 | 107 | 332 | 0 |
| EY133898 | 211 | 107 | 317 | 0 |
| EE091344 | 216 | 107 | 322 | 0 |
| DR050772 | 301 | 31 | 322 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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