Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_3249g0010 |
Family | AA3 |
Protein Properties | Length: 531 Molecular Weight: 57907.8 Isoelectric Point: 5.3555 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 28 | 529 | 0 |
MTAAKSRYDYIVVGGGTAGCPLAATLSTDYSVLVVERGGSPYGNPDIEKADRYGKVLLEADKYTSPAQTFISEDKKISGENVPLARARVLGGGTAINAGF YSRASSDYVSNMGWDKRLVEESHKWVENQIVHEPGQLSPWSDDIQKGLVEAEVVPDSGYTLDHLEGTKTSASIFDSNGKRHTAADLLKSANATNIVVLLY ATVTKVLFNETQDGSNRPPRARGVEFRDGLGQLHKVFLNELSCSSESKNTLEEKGKFPEVILTAGALGSPQLLLLSGIGPSEHLSNFNIPLVLDLPWVGK RIQDNPIASVTCKSHNFYAQQVVGITPQNYFEAPSIFVKSSPDGRNEYNISIFEKLASPLSRGELLLVGTDPRDNPSVRYDYYKDDDNLDFERGKQGMRV IAQLLNTPSLQNSNASCFHGLQLDGSDDAAMAQICRDTLSTVWHFHGGCEVGYVVNSRYQVNGVDNLRIVDESTYRDSPGSNPQATTMMLGRYVGVKILQ ER |
Full Sequence |
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Protein Sequence Length: 531 Download |
MLSSNQRSSS SQAATTDFPF PLKIVDGMTA AKSRYDYIVV GGGTAGCPLA ATLSTDYSVL 60 VVERGGSPYG NPDIEKADRY GKVLLEADKY TSPAQTFISE DKKISGENVP LARARVLGGG 120 TAINAGFYSR ASSDYVSNMG WDKRLVEESH KWVENQIVHE PGQLSPWSDD IQKGLVEAEV 180 VPDSGYTLDH LEGTKTSASI FDSNGKRHTA ADLLKSANAT NIVVLLYATV TKVLFNETQD 240 GSNRPPRARG VEFRDGLGQL HKVFLNELSC SSESKNTLEE KGKFPEVILT AGALGSPQLL 300 LLSGIGPSEH LSNFNIPLVL DLPWVGKRIQ DNPIASVTCK SHNFYAQQVV GITPQNYFEA 360 PSIFVKSSPD GRNEYNISIF EKLASPLSRG ELLLVGTDPR DNPSVRYDYY KDDDNLDFER 420 GKQGMRVIAQ LLNTPSLQNS NASCFHGLQL DGSDDAAMAQ ICRDTLSTVW HFHGGCEVGY 480 VVNSRYQVNG VDNLRIVDES TYRDSPGSNP QATTMMLGRY VGVKILQERA G 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 5.0e-8 | 31 | 69 | 41 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 1.0e-31 | 204 | 518 | 366 | + choline dehydrogenase; Validated | ||
TIGR01810 | betA | 1.0e-35 | 36 | 518 | 558 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
COG2303 | BetA | 1.0e-47 | 28 | 530 | 579 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 4.0e-167 | 33 | 531 | 557 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25456.1 | 0 | 1 | 530 | 20 | 557 | unknown [Picea sitchensis] |
EMBL | CBI34759.1 | 0 | 31 | 529 | 43 | 571 | unnamed protein product [Vitis vinifera] |
EMBL | CBI35951.1 | 0 | 35 | 531 | 62 | 588 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277531.1 | 0 | 35 | 529 | 50 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282510.1 | 0 | 31 | 529 | 9 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 35 | 530 | 27 | 518 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |
PDB | 3gdp_A | 0 | 35 | 530 | 27 | 518 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |
PDB | 3gdn_B | 0 | 35 | 530 | 27 | 518 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 35 | 530 | 27 | 518 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 35 | 530 | 27 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO368210 | 301 | 195 | 481 | 0 |
HO796743 | 554 | 36 | 531 | 0 |
DR385734 | 293 | 38 | 330 | 0 |
DR576847 | 236 | 299 | 530 | 0 |
FD731099 | 232 | 291 | 518 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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