Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_3384g0010 |
Family | GT8 |
Protein Properties | Length: 540 Molecular Weight: 61504.6 Isoelectric Point: 5.5966 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 109 | 358 | 0 |
AKKCGAYVTFLAGCGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEDHRLQLRRQGCIVRQIQPIHPPDNEVQFSMPYYVLNYSKLRIWEFEEYSKMVY LDADIQVFHNIDHLFDMPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVSWPIELGQRPSLYFNAGMFVFEPSHLTFDCLLETLMATVPTPFAEQDF LNMFFEKIYKPIPLAYNLVLAMMWRHPQNVDLDTVKVVHYCAAGSKPWRF |
Full Sequence |
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Protein Sequence Length: 540 Download |
MRSRLAQQTK SVSRPIVASG QLPRTSLCIS HMNTCQLVPN FPFIPTIPLG PFQRSRVFEN 60 HSNGTPSTLR SFRELCLDAP LRIPVLTIEL IIDQISPVDQ LFGAKAAAAK KCGAYVTFLA 120 GCGDYVKGVV GLAKGLRKVK SAYPLVVAVL PDVPEDHRLQ LRRQGCIVRQ IQPIHPPDNE 180 VQFSMPYYVL NYSKLRIWEF EEYSKMVYLD ADIQVFHNID HLFDMPDGYF YAVMDCFCEK 240 TWSHTPQYKI GYCQQCPDKV SWPIELGQRP SLYFNAGMFV FEPSHLTFDC LLETLMATVP 300 TPFAEQDFLN MFFEKIYKPI PLAYNLVLAM MWRHPQNVDL DTVKVVHYCA AGSKPWRFSG 360 KEENMEREDI KTLVQKWWDI YNDPSLDHLG SGDTVPDPIS EADGKSNDLE QDFLNMYFEK 420 IYKPIPLVYN LVLAMMWRHP QNVDLDTVKV VHYCAAGSKP WRFSGEEENM EREDIKTLVQ 480 KWWDIYNDPS LDHLGSGDTV PDPISEADGK SNDLQQVAAA NSFLPAVPTY PNLMPAPPAA 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd02537 | GT8_Glycogenin | 2.0e-18 | 410 | 488 | 82 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
pfam01501 | Glyco_transf_8 | 1.0e-53 | 116 | 358 | 262 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
PLN00176 | PLN00176 | 6.0e-58 | 410 | 540 | 131 | + galactinol synthase | ||
cd02537 | GT8_Glycogenin | 8.0e-88 | 114 | 383 | 273 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
PLN00176 | PLN00176 | 0 | 114 | 388 | 275 | + galactinol synthase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK22810.1 | 0 | 94 | 411 | 4 | 322 | unknown [Picea sitchensis] |
GenBank | ABK22810.1 | 0 | 394 | 540 | 209 | 346 | unknown [Picea sitchensis] |
GenBank | ABK22947.1 | 0 | 94 | 421 | 4 | 332 | unknown [Picea sitchensis] |
GenBank | ABK22947.1 | 0 | 394 | 540 | 209 | 345 | unknown [Picea sitchensis] |
GenBank | ABK23436.1 | 0 | 102 | 403 | 10 | 315 | unknown [Picea sitchensis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2t_A | 0.0000000000005 | 114 | 382 | 27 | 276 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2x_B | 0.0000000000005 | 114 | 382 | 6 | 255 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2x_A | 0.0000000000005 | 114 | 382 | 6 | 255 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2v_B | 0.0000000000005 | 114 | 382 | 6 | 255 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2v_A | 0.0000000000005 | 114 | 382 | 6 | 255 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX307838 | 274 | 94 | 367 | 0 |
EX389552 | 263 | 112 | 374 | 0 |
GH281423 | 276 | 84 | 358 | 0 |
EX389552 | 86 | 394 | 479 | 2e-37 |
EX307838 | 79 | 394 | 472 | 1e-31 |
Sequence Alignments (This image is cropped. Click for full image.) |
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