| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_366599g0010 |
| Family | GH28 |
| Protein Properties | Length: 146 Molecular Weight: 15946.6 Isoelectric Point: 4.207 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 9 | 106 | 1.2e-26 |
| GGSGFAQAIKYQNVYMRNVSYPIIIDQYYCDSPTSCKNQTSAVEVSEVWYDNISGTSATDEAIRFACSDSVPCKNILLRNIDLRLTSGDAAASFCESV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 146 Download |
| SDSFSHLQGG SGFAQAIKYQ NVYMRNVSYP IIIDQYYCDS PTSCKNQTSA VEVSEVWYDN 60 ISGTSATDEA IRFACSDSVP CKNILLRNID LRLTSGDAAA SFCESVMGFS LGSVTPSSCF 120 EDWAAEFHQG EGTIVQVVNP RSKDEL 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 4.0e-22 | 10 | 119 | 111 | + polygalacturonase/glycoside hydrolase family protein | ||
| pfam00295 | Glyco_hydro_28 | 3.0e-24 | 8 | 106 | 99 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02218 | PLN02218 | 1.0e-24 | 8 | 92 | 85 | + polygalacturonase ADPG | ||
| PLN02155 | PLN02155 | 8.0e-29 | 11 | 120 | 110 | + polygalacturonase | ||
| PLN02793 | PLN02793 | 3.0e-45 | 8 | 122 | 115 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU43991.1 | 2e-37 | 8 | 120 | 295 | 407 | unknown protein [Oryza sativa Japonica Group] |
| GenBank | ABR18059.1 | 8e-39 | 8 | 123 | 346 | 461 | unknown [Picea sitchensis] |
| GenBank | EEC79626.1 | 2e-37 | 8 | 120 | 295 | 407 | hypothetical protein OsI_20838 [Oryza sativa Indica Group] |
| GenBank | EEE64553.1 | 8e-38 | 8 | 120 | 254 | 366 | hypothetical protein OsJ_19405 [Oryza sativa Japonica Group] |
| RefSeq | XP_002525360.1 | 1e-35 | 3 | 118 | 350 | 464 | Polygalacturonase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rmg_A | 0.00002 | 8 | 108 | 255 | 355 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR468844 | 139 | 8 | 146 | 0 |
| FD732107 | 137 | 8 | 144 | 0 |
| DR475371 | 117 | 30 | 146 | 0 |
| GT250320 | 139 | 8 | 146 | 0 |
| DR544848 | 115 | 32 | 146 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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