y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_41268g0010 |
Family | AA3 |
Protein Properties | Length: 562 Molecular Weight: 60981.4 Isoelectric Point: 10.0461 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 50 | 554 | 0 |
KAAAKAYDYIVVGGGTAGCPLAATLSTKYSVLVIERGGSPYGVPEIQNAKAFGNLLGETDKYTSPAQSFITEDGLTLARARVLGGATALNAAYYSRASSE YVRYMGWDETLVKESYEWVEKQNAFQPARLSNWSLAFKNGLLEAGVVPDNGYTLEHVEGTKISASTFDNNGQRHTAADLLKTANPKNIVVLLNATVSRIL FNSPAPQGKKRGSFRKPKARGVEFMDAHGRFYQAFLKGSSRSSEVIVSAGSIGSSQVLLLSGIGPSQQLKQFNIPLVLNLPFVGKGIQDSPRATVTLQSP TPLEFSSIQVVGILKGSQTYIESSSFVQPISSVNGSASPQPKNIYGGNIFEKLAFPLSRGELSLRSRDPRDNPSVRYNYYSHPLDLQRCVQGARMIAKIL NTRSLRRFAYTAGSKSSNGATANGFHFIGTAMPKNTRDYATMAQFCRDTVNTMWHFHGGCHVGSVVNERYQVKGVDSLRIVDGSTFKDGPGTNPQATTMM LGRYM |
Full Sequence |
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Protein Sequence Length: 562 Download |
METMLVVNFH AWLLLMLMML SSTLLLSSSN AATPSSNKNP FVFTSVDGQK AAAKAYDYIV 60 VGGGTAGCPL AATLSTKYSV LVIERGGSPY GVPEIQNAKA FGNLLGETDK YTSPAQSFIT 120 EDGLTLARAR VLGGATALNA AYYSRASSEY VRYMGWDETL VKESYEWVEK QNAFQPARLS 180 NWSLAFKNGL LEAGVVPDNG YTLEHVEGTK ISASTFDNNG QRHTAADLLK TANPKNIVVL 240 LNATVSRILF NSPAPQGKKR GSFRKPKARG VEFMDAHGRF YQAFLKGSSR SSEVIVSAGS 300 IGSSQVLLLS GIGPSQQLKQ FNIPLVLNLP FVGKGIQDSP RATVTLQSPT PLEFSSIQVV 360 GILKGSQTYI ESSSFVQPIS SVNGSASPQP KNIYGGNIFE KLAFPLSRGE LSLRSRDPRD 420 NPSVRYNYYS HPLDLQRCVQ GARMIAKILN TRSLRRFAYT AGSKSSNGAT ANGFHFIGTA 480 MPKNTRDYAT MAQFCRDTVN TMWHFHGGCH VGSVVNERYQ VKGVDSLRIV DGSTFKDGPG 540 TNPQATTMML GRYMGMKLLQ GQ 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 4.0e-39 | 57 | 551 | 566 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 2.0e-40 | 57 | 551 | 539 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PRK02106 | PRK02106 | 2.0e-47 | 52 | 551 | 584 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 4.0e-50 | 51 | 552 | 565 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 43 | 562 | 555 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK22756.1 | 0 | 274 | 560 | 1 | 288 | unknown [Picea sitchensis] |
GenBank | ABK25456.1 | 0 | 13 | 562 | 14 | 556 | unknown [Picea sitchensis] |
EMBL | CBI31862.1 | 0 | 56 | 559 | 47 | 534 | unnamed protein product [Vitis vinifera] |
EMBL | CBI34759.1 | 0 | 35 | 559 | 25 | 568 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282510.1 | 0 | 52 | 559 | 9 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 55 | 560 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 55 | 560 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 55 | 560 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 55 | 560 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 55 | 560 | 26 | 516 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |