CAZyme Information

Basic Information
SpeciesPicea abies
Cazyme IDMA_42717g0010
FamilyCBM49
Protein PropertiesLength: 619 Molecular Weight: 67604.4 Isoelectric Point: 7.026
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM495276041.3e-30
  IAVSQTVTSSWSSHGRTYYRYSTLITNKSKQTVKNIKFSVQRLYGPLWGLSKTGGSSYSLPYWQSLAPGQSFDFVYIH
GH9224830
  DYGAALSKSIMFYEAQRSGKLPSDQRVNWRSDSGLRDGSANGVDLVGGYYDAGDNVKFGLPMAFTVTMLSWSVIEYGKQLASSGELGHSMEAIKWGSDYL
  LKAHTEPDVLYGEVGDGNTDHNCWQRPEDMTTPRQAYRIDANNPGSDLAGETAAAMAAASIVFRHSDPAYSNELINHAKQLFSFADKYRGKYDSSITVAQ
  KYYASKSGYADELLWAATWLHEATGDLAYMNYLVDNAGSLGGTGWRMTEFSWDVKYAGVQVLASKFLMQGRGGQSNAVLQSYQENAEFFMCSCLQKGNRN
  VQKTPGGLLFWQKWNNIQFVTSASFLLTVYSDYLTGARKNLQCPGGTVQPSELLSFAQSQIDYVLGDNPRATSYMVGYGSNYPHQVHHRASSIVSYKVNP
  FFVSCRGGYATWFSSKGSDPNVLHGALVGGPDQNDNFADERDNYEQTEPATYNNGPVVGVLA
Full Sequence
Protein Sequence     Length: 619     Download
MASYLYVLSL ALCVGAAAAG HDYGAALSKS IMFYEAQRSG KLPSDQRVNW RSDSGLRDGS    60
ANGVDLVGGY YDAGDNVKFG LPMAFTVTML SWSVIEYGKQ LASSGELGHS MEAIKWGSDY    120
LLKAHTEPDV LYGEVGDGNT DHNCWQRPED MTTPRQAYRI DANNPGSDLA GETAAAMAAA    180
SIVFRHSDPA YSNELINHAK QLFSFADKYR GKYDSSITVA QKYYASKSGY ADELLWAATW    240
LHEATGDLAY MNYLVDNAGS LGGTGWRMTE FSWDVKYAGV QVLASKFLMQ GRGGQSNAVL    300
QSYQENAEFF MCSCLQKGNR NVQKTPGGLL FWQKWNNIQF VTSASFLLTV YSDYLTGARK    360
NLQCPGGTVQ PSELLSFAQS QIDYVLGDNP RATSYMVGYG SNYPHQVHHR ASSIVSYKVN    420
PFFVSCRGGY ATWFSSKGSD PNVLHGALVG GPDQNDNFAD ERDNYEQTEP ATYNNGPVVG    480
VLARLHAGGN LNQLLPVAVP APVSKPKPSP APVQSSPPVA PNDYSPIAVS QTVTSSWSSH    540
GRTYYRYSTL ITNKSKQTVK NIKFSVQRLY GPLWGLSKTG GSSYSLPYWQ SLAPGQSFDF    600
VYIHASPQAT VSVQSYDMN 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PLN02171PLN0217105616615+
PLN02340PLN0234005616615+
PLN02420PLN02420027485461+
PLN00119PLN00119027485459+
pfam00759Glyco_hydro_9027483459+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAI68019.102061825619endo-beta-1,4-glucanase [Prunus persica]
EMBLCAI68020.102061825619endo-beta-1,4-glucanase [Prunus persica]
RefSeqXP_002270880.10561813628PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002299478.1016181621predicted protein [Populus trichocarpa]
RefSeqXP_002303645.101961824621glycosyl hydrolase family 9 [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1ksd_A0214893432B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor
PDB1ksc_A0214893432B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor
PDB1ks8_A0214893432A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5.
PDB2xfg_A01748620460B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB4tf4_B0225005458B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
Signal Peptide
Cleavage Site
0
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO783495376274020
DT6367662751524260
GT7420423261564810
DR6912362611524120
DR0956542571333890
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_01464.1.518.596Aquca_037_00141.1.542.619Aquca_013_00114.1.534.611
Arabidopsis lyrata474038.535.614489943.534.611892975.528.605
Arabidopsis thalianaAT1G64390.1.528.605AT1G48930.1.535.614AT4G11050.1.534.611
Brachypodium distachyonBradi2g32270.1.538.616Bradi2g07150.1.534.613
Brassica rapaBra032270.517.596Bra000732.268.345Bra027699.529.606Bra018765.532.611Bra027735.528.605
Carica papayaevm.model.supercontig_183.4.367.446evm.TU.contig_27379.2.529.606
Capsella rubellaCarubv10012624m.534.613Carubv10003874m.535.612Carubv10019981m.528.605
Citrus clementinaCiclev10019301m.537.614Ciclev10033912m.569.648
Citrus sinensisorange1.1g043219m.499.578orange1.1g019436m.249.326orange1.1g017562m.277.354orange1.1g011712m.387.464orange1.1g006835m.537.614
Cucumis sativusCucsa.107370.1.527.604Cucsa.128330.1.503.582Cucsa.303850.1.533.608
Eucalyptus grandisEucgr.D01733.1.529.606Eucgr.J00862.1.484.562Eucgr.E00858.1.526.602Eucgr.D01896.1
Fragaria vescamrna32087.1-v1.0-hybrid.632.709mrna11058.1-v1.0-hybrid.533.612
Glycine maxGlyma12g03050.1.537.616Glyma05g36930.1.532.609Glyma08g02610.1.533.610Glyma11g10760.1.535.614
Gossypium raimondiiGorai.003G080800.1.533.609Gorai.008G254000.1.534.611Gorai.004G133700.1.536.613Gorai.005G210200.1.530.608
Linum usitatissimumLus10003888.529.606Lus10010201.535.613Lus10032377.534.611Lus10017402.508.586Lus10001833.527.603
Lus10033956
Malus domesticaMDP0000276676.536.613MDP0000131267.528.605MDP0000548943MDP0000722052.313.390MDP0000826600.538.616
Manihot esculentacassava4.1_004404m.486.565cassava4.1_003698m.530.607
Medicago truncatulaMedtr4g074960.1.571.649
Mimulus guttatusmgv1a003302m.501.580
Oryza sativaLOC_Os01g12070.1.544.625LOC_Os01g12030.1.543.620LOC_Os04g57860.1.531.610LOC_Os05g12150.1.535.613
Panicum virgatumPavirv00000152m.548.625Pavirv00066185m.348.426Pavirv00000772m.535.612Pavirv00030375m.537.614Pavirv00029375m.528.607
Physcomitrella patensPp1s176_127V6.1.544.623
Phaseolus vulgarisPhvul.011G030300.1.567.645Phvul.002G297600.1.530.607
Picea abiesMA_895058g0010MA_10437098g0010.516.596MA_127108g0010.524.603MA_42717g0010.527.604MA_10241783g0010.543.621
MA_19509g0020.547.626
Populus trichocarpaPotri.003G139600.1.530.607Potri.001G092200.1.530.607Potri.001G092200.5.285.362Potri.007G071200.1.520.599Potri.007G071200.2.519.598
Potri.001G092200.4.375.452
Prunus persicappa002939m.528.605ppa022524m.499.578
Ricinus communis29675.m000388.528.607
Setaria italicaSi000642m.549.626Si021474m.530.607Si021476m.528.606
Selaginella moellendorffii234652.525.60399802.550.630
Sorghum bicolorSb09g006670.1.535.612Sb03g001560.1.561.639Sb06g032760.1.534.615
Thellungiella halophilaThhalv10023353m.527.604Thhalv10011318m.534.613Thhalv10028514m.535.612
Vitis viniferaGSVIVT01019523001.537.614GSVIVT01012043001.524.602
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)