| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_427851g0010 |
| Family | GH28 |
| Protein Properties | Length: 255 Molecular Weight: 26223.1 Isoelectric Point: 4.0258 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH28 | 1 | 182 | 0 |
| MIQNCTIATGDDCISIVTESSDIQINELICGPGHGISIGSLGKYNTKDTVSDVVVNGASLSGTQNGLRIKTWQGGSGYAQGIIFQHVKMINVSNPIIIDQ NYCAPSSPCQNQPTPICNNQSSAVQVNNVTYTDITGTSATQDAIKLACSATAPCTNIVLEDISLQLSNGDTASSLSANVQGS | |||
| Full Sequence |
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| Protein Sequence Length: 255 Download |
| MIQNCTIATG DDCISIVTES SDIQINELIC GPGHGISIGS LGKYNTKDTV SDVVVNGASL 60 SGTQNGLRIK TWQGGSGYAQ GIIFQHVKMI NVSNPIIIDQ NYCAPSSPCQ NQPTPICNNQ 120 SSAVQVNNVT YTDITGTSAT QDAIKLACSA TAPCTNIVLE DISLQLSNGD TASSLSANVQ 180 GSSNGQVTPP VNFSFTGTSA TQDAIKLACS ATAPCTNIVL EDISLQLNNG DTASSLSANV 240 QGSSNGQVTP PVNFS |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02793 | PLN02793 | 2.0e-12 | 192 | 255 | 67 | + Probable polygalacturonase | ||
| PLN02218 | PLN02218 | 2.0e-46 | 2 | 192 | 191 | + polygalacturonase ADPG | ||
| pfam00295 | Glyco_hydro_28 | 7.0e-47 | 2 | 176 | 175 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02793 | PLN02793 | 2.0e-68 | 2 | 204 | 203 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK23977.1 | 0 | 1 | 194 | 245 | 436 | unknown [Picea sitchensis] |
| GenBank | ABK26513.1 | 0 | 1 | 194 | 232 | 425 | unknown [Picea sitchensis] |
| GenBank | ACN40008.1 | 0 | 1 | 194 | 245 | 436 | unknown [Picea sitchensis] |
| Swiss-Prot | P35336 | 0 | 2 | 189 | 274 | 453 | PGLR_ACTDE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase; Flags: Precursor |
| RefSeq | XP_002517603.1 | 0 | 2 | 202 | 222 | 414 | Polygalacturonase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 0.000000000006 | 7 | 102 | 219 | 314 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1rmg_A | 0.0000000004 | 1 | 182 | 187 | 356 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| PDB | 2iq7_G | 0.000000003 | 11 | 164 | 176 | 319 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2iq7_F | 0.000000003 | 11 | 164 | 176 | 319 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2iq7_E | 0.000000003 | 11 | 164 | 176 | 319 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO212349 | 194 | 1 | 194 | 0 |
| CO481654 | 194 | 1 | 194 | 0 |
| CO481414 | 194 | 1 | 194 | 0 |
| CO212349 | 61 | 195 | 255 | 3e-27 |
| CO481654 | 61 | 195 | 255 | 2e-26 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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