Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_529833g0010 |
Family | GT8 |
Protein Properties | Length: 391 Molecular Weight: 46602.3 Isoelectric Point: 6.1453 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 126 | 237 | 4.5e-22 |
KEAYATILHSSEFYVCGAIALVQSICMSGSTKDLIILVDKKVGEEKREGLRVASWQVREICRIRNPRAEKDSYNEWNYSKFKLWQLTDYDKIIFINLDLL ILRNLDFLFDLR |
Full Sequence |
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Protein Sequence Length: 391 Download |
IKIERVDDDV AWTDLFPEWI DEEEQYTTPV HPTVPMPEIS NETKFDLVVA RLPCRKPEKG 60 WSRDVLRLQI HLISANVAAR ASRNGEKVEM LFFSSCRQMP DLFRCEDLVK NQGMDAVWLY 120 AYDVKKEAYA TILHSSEFYV CGAIALVQSI CMSGSTKDLI ILVDKKVGEE KREGLRVASW 180 QVREICRIRN PRAEKDSYNE WNYSKFKLWQ LTDYDKIIFI NLDLLILRNL DFLFDLREIS 240 ATGNSRRDIV SYNGGDQGYL NEVFTWWHRI PKCMNYLKHF WSNDTEEFEM KMSLFGVDPL 300 ELYVLHYLGI KPWLYYRDYD CNWNVENQRT YASNVAHARW WKIHDNMPRQ LHQFCLTVQK 360 EILEWDRMQV QIFGFLDQHW KLNITDPRLH L |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00176 | PLN00176 | 0.0007 | 125 | 216 | 95 | + galactinol synthase | ||
pfam01501 | Glyco_transf_8 | 3.0e-9 | 130 | 216 | 101 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 5.0e-42 | 127 | 347 | 255 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS90653.1 | 0 | 1 | 391 | 193 | 638 | putative glycogenin [Oryza sativa Japonica Group] |
GenBank | ABK25357.1 | 0 | 1 | 391 | 162 | 611 | unknown [Picea sitchensis] |
DDBJ | BAG90458.1 | 0 | 1 | 389 | 92 | 535 | unnamed protein product [Oryza sativa Japonica Group] |
GenBank | EEC79261.1 | 0 | 1 | 391 | 193 | 638 | hypothetical protein OsI_20036 [Oryza sativa Indica Group] |
RefSeq | XP_002510223.1 | 0 | 1 | 388 | 130 | 584 | glycogenin, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2t_A | 0.0000000000001 | 119 | 343 | 18 | 274 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2x_B | 0.0000000000006 | 127 | 343 | 5 | 253 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2x_A | 0.0000000000006 | 127 | 343 | 5 | 253 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2v_B | 0.0000000000006 | 127 | 343 | 5 | 253 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2v_A | 0.0000000000006 | 127 | 343 | 5 | 253 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW772223 | 275 | 143 | 391 | 0 |
GW771865 | 246 | 130 | 351 | 0 |
CF402161 | 228 | 1 | 195 | 0 |
CO253323 | 265 | 120 | 360 | 0 |
DR575492 | 219 | 199 | 391 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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