| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_5735762g0010 |
| Family | GH28 |
| Protein Properties | Length: 226 Molecular Weight: 25544.6 Isoelectric Point: 5.8882 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 113 | 201 | 2.6e-29 |
| KGEIGTIDGQGEVWWDSYHSHNLNYTRLHLIEVMISTDIVISNLTFLNSPFWNIHSVYYNNVHIHNVTILAPSHSPNTDGIDLDSSSDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 226 Download |
| DSSALAGTEQ NKIGSSPKVH DLCIHLYIYA LLVLYCINEV RWAIRYGRQE KEIKLITSNS 60 YLQQQGACRF NKALSLRPHS VSITEFGAVG DGVTLNTHAF ENAMFYLRSF ADKGEIGTID 120 GQGEVWWDSY HSHNLNYTRL HLIEVMISTD IVISNLTFLN SPFWNIHSVY YNNVHIHNVT 180 ILAPSHSPNT DGIDLDSSSD VKRGRLETPT EPRAHDELMT EPEVPE 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02218 | PLN02218 | 4.0e-8 | 112 | 202 | 97 | + polygalacturonase ADPG | ||
| PLN03010 | PLN03010 | 1.0e-9 | 117 | 202 | 86 | + polygalacturonase | ||
| PLN03003 | PLN03003 | 1.0e-10 | 117 | 201 | 85 | + Probable polygalacturonase At3g15720 | ||
| pfam00295 | Glyco_hydro_28 | 5.0e-15 | 117 | 202 | 87 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF99735.1 | 0.0000000000007 | 68 | 114 | 14 | 60 | glycoside hydrolase family 28 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF99735.1 | 1e-32 | 114 | 201 | 137 | 224 | glycoside hydrolase family 28 protein, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001051812.1 | 0.0000000000007 | 68 | 114 | 30 | 76 | Os03g0833800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001051812.1 | 1e-32 | 114 | 201 | 153 | 240 | Os03g0833800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149385.1 | 3e-31 | 114 | 201 | 155 | 242 | LOC100283011 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 0.00008 | 15 | 201 | 7 | 212 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3jur_D | 0.00009 | 137 | 197 | 187 | 245 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_C | 0.00009 | 137 | 197 | 187 | 245 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_B | 0.00009 | 137 | 197 | 187 | 245 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_A | 0.00009 | 137 | 197 | 187 | 245 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
