Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_577764g0010 |
Family | AA3 |
Protein Properties | Length: 344 Molecular Weight: 37851.9 Isoelectric Point: 9.7624 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 17 | 340 | 0 |
AADLLKTANPRNIVVLLNATVSRILFNSASEGTKDGSSEKPRARGVEFMDRHGRSYQALLKESSRSSEVIVSAGALGSPQLLLLSGIGPSEHLREFNISS ILHLPFVGQGIQDNPRATVVLQSPTPLKFSSIQVVAILKGSQTYIESSSFVNRSASSHPKNVYIGNIFEKLAFPLSRGELRLRSTDPRDNPSVRYNYYSH PLDLQRCVDGVRVIDKLLKTRSVERFAYAAANESSREFHIIGQALPENPSNDAAMAEFCRATLKTMWHFHGGCEIGSVINEKYQVNGVDSLRIVDGSTFR DGPGTNPQATTMMLGRYIGMKILQ |
Full Sequence |
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Protein Sequence Length: 344 Download |
TKISASTFDN NGKRHTAADL LKTANPRNIV VLLNATVSRI LFNSASEGTK DGSSEKPRAR 60 GVEFMDRHGR SYQALLKESS RSSEVIVSAG ALGSPQLLLL SGIGPSEHLR EFNISSILHL 120 PFVGQGIQDN PRATVVLQSP TPLKFSSIQV VAILKGSQTY IESSSFVNRS ASSHPKNVYI 180 GNIFEKLAFP LSRGELRLRS TDPRDNPSVR YNYYSHPLDL QRCVDGVRVI DKLLKTRSVE 240 RFAYAAANES SREFHIIGQA LPENPSNDAA MAEFCRATLK TMWHFHGGCE IGSVINEKYQ 300 VNGVDSLRIV DGSTFRDGPG TNPQATTMML GRYIGMKILQ EVKE |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03970 | Rv0697 | 3.0e-32 | 10 | 331 | 336 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
TIGR01810 | betA | 1.0e-35 | 11 | 339 | 374 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
COG2303 | BetA | 1.0e-37 | 10 | 341 | 369 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PRK02106 | PRK02106 | 1.0e-40 | 11 | 339 | 372 | + choline dehydrogenase; Validated | ||
PLN02785 | PLN02785 | 2.0e-117 | 1 | 341 | 383 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK22756.1 | 0 | 65 | 341 | 1 | 289 | unknown [Picea sitchensis] |
GenBank | ABK25456.1 | 0 | 1 | 344 | 209 | 558 | unknown [Picea sitchensis] |
RefSeq | XP_002275841.1 | 0 | 1 | 341 | 204 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277531.1 | 0 | 1 | 341 | 204 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 1 | 341 | 174 | 516 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 1 | 341 | 181 | 517 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 1 | 341 | 181 | 517 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 1 | 341 | 181 | 517 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 1 | 341 | 181 | 517 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 1 | 341 | 181 | 517 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE480478 | 309 | 33 | 341 | 0 |
DV974032 | 303 | 33 | 335 | 0 |
GO362815 | 300 | 23 | 310 | 0 |
CO164833 | 305 | 27 | 330 | 0 |
GT739957 | 303 | 28 | 324 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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