Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_604666g0010 |
Family | GH10 |
Protein Properties | Length: 387 Molecular Weight: 44594.3 Isoelectric Point: 6.0224 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 27 | 304 | 0 |
QKSRQFPFGSAIAKTILGNEPYQRWFVKRFNTAVFENELKWYTTESEQGKLNYSLADEMLAFCNANSISARGHNIFWEDGISARGHNIFWEDPKCNPSWV SSLDKEQLQKAVSSRIESLVSRYAGSFINWDVNNELLHFSFYEDKLGPNASNSFFQAAQKIDPWTPMFMNDYNVIETCNDKQATVDLYIEKLQELRNSGR VIEGIGLESHFSKPNIPLMRAVLDKFSTLGLPIWLTEVDVSSKFDQETQAHYLEQILREGFSHPAVEGIMMWSALDSE |
Full Sequence |
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Protein Sequence Length: 387 Download |
KRKKRAIVHV TDLNGNRLEN AEVIVKQKSR QFPFGSAIAK TILGNEPYQR WFVKRFNTAV 60 FENELKWYTT ESEQGKLNYS LADEMLAFCN ANSISARGHN IFWEDGISAR GHNIFWEDPK 120 CNPSWVSSLD KEQLQKAVSS RIESLVSRYA GSFINWDVNN ELLHFSFYED KLGPNASNSF 180 FQAAQKIDPW TPMFMNDYNV IETCNDKQAT VDLYIEKLQE LRNSGRVIEG IGLESHFSKP 240 NIPLMRAVLD KFSTLGLPIW LTEVDVSSKF DQETQAHYLE QILREGFSHP AVEGIMMWSA 300 LDSEGCYQMC LTDMAFNNLP AGDVVDRLLD DWRTRTRGKT DEKGYFKFEG FLGDYEFVAR 360 YATKNVTKTS TLRQLDHHGI EHVYIQI |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 9.0e-37 | 27 | 302 | 300 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 8.0e-55 | 32 | 298 | 283 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-73 | 65 | 322 | 279 | + Glycosyl hydrolase family 10. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94922.1 | 0 | 1 | 387 | 98 | 470 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001049529.1 | 0 | 1 | 387 | 29 | 401 | Os03g0243700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140909.1 | 0 | 1 | 387 | 188 | 560 | hypothetical protein LOC100272986 [Zea mays] |
RefSeq | XP_002277675.1 | 0 | 1 | 387 | 177 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 2 | 387 | 102 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nq6_A | 2e-28 | 34 | 325 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 3w24_A | 4e-26 | 32 | 276 | 17 | 264 | A Chain A, The High-resolution Crystal Structure Of Tsxyla, Intracellular Xylanase From Thermoanaerobacterium Saccharolyticum Jw/sl-ys |
PDB | 3w29_A | 2e-25 | 32 | 276 | 17 | 264 | A Chain A, The High-resolution Crystal Structure Of Tsxyla, Intracellular Xylanase From Thermoanaerobacterium Saccharolyticum Jw/sl-ys |
PDB | 3w28_A | 2e-25 | 32 | 276 | 17 | 264 | A Chain A, The High-resolution Crystal Structure Of Tsxyla, Intracellular Xylanase From Thermoanaerobacterium Saccharolyticum Jw/sl-ys |
PDB | 3w27_A | 2e-25 | 32 | 276 | 17 | 264 | A Chain A, The High-resolution Crystal Structure Of Tsxyla, Intracellular Xylanase From /thermoanaerobacterium Saccharolyticum Jw/sl-ys485/: The Complex Of The E251a Mutant With Xylobiose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR953916 | 306 | 7 | 312 | 0 |
EX330854 | 221 | 167 | 387 | 0 |
GE471597 | 277 | 2 | 278 | 0 |
DV530577 | 263 | 48 | 310 | 0 |
EX330854 | 28 | 147 | 174 | 0.009 |
Sequence Alignments (This image is cropped. Click for full image.) |
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