Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_61030g0020 |
Family | GT47 |
Protein Properties | Length: 271 Molecular Weight: 30938 Isoelectric Point: 9.0573 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 4 | 223 | 0 |
SYIYKPKTYDLSPLTQFLADYIDVVANKYPFWNRSLGADHFMLSCHDWAPVASTGNPFLYNNSIRVLCNANASEGFKPTKDVTLPEMNLLTGLMTGLVGG LSALERPIFAFFAGGNHGPVRPILFKHWKEGTDVDIHVSERVPKGLSYHEFLKKSRYCLCPSGYEVASPRIVESIYSECVPVIISKNYVLPFSDVLNWTS FSVQVPLSEIPNLKTILQSI |
Full Sequence |
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Protein Sequence Length: 271 Download |
MMVSYIYKPK TYDLSPLTQF LADYIDVVAN KYPFWNRSLG ADHFMLSCHD WAPVASTGNP 60 FLYNNSIRVL CNANASEGFK PTKDVTLPEM NLLTGLMTGL VGGLSALERP IFAFFAGGNH 120 GPVRPILFKH WKEGTDVDIH VSERVPKGLS YHEFLKKSRY CLCPSGYEVA SPRIVESIYS 180 ECVPVIISKN YVLPFSDVLN WTSFSVQVPL SEIPNLKTIL QSIPVDKYVQ MQRRVKQVQK 240 HFLINQPPKP YDLFHMILHS IWLRRLNIQI S |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-54 | 19 | 223 | 215 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001059081.1 | 0 | 2 | 270 | 330 | 601 | Os07g0188700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002264076.1 | 0 | 1 | 271 | 62 | 331 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284018.1 | 0 | 1 | 270 | 62 | 330 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 1 | 268 | 62 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 1 | 270 | 297 | 565 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE475605 | 274 | 1 | 271 | 0 |
GO363500 | 244 | 1 | 244 | 0 |
EX353631 | 235 | 37 | 271 | 0 |
DV974217 | 270 | 1 | 267 | 0 |
EC962627 | 245 | 26 | 270 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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