| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_614767g0010 |
| Family | PL1 |
| Protein Properties | Length: 185 Molecular Weight: 20739.3 Isoelectric Point: 9.4427 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 1 | 88 | 2.8e-33 |
| STAITISNNHFTHHDKVMLLGHNDDYAQDKNMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSEGNRYL | |||
| Full Sequence |
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| Protein Sequence Length: 185 Download |
| STAITISNNH FTHHDKVMLL GHNDDYAQDK NMQVTIAYNH FGEGLVQRMP RCRHGYFHVV 60 NNDYTHWEMY AIGGSANPTI NSEGNRYLAP VDRFAKEVTK RVETPHGRWK HWNWRSQGDL 120 FLNGAFFTKS GAGASSSYTK ASSLGAKPVS RVKFLTGNAE CQCMGMVGLR SWARSACVCT 180 HGFHA |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 3.0e-15 | 1 | 85 | 88 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 1.0e-43 | 1 | 87 | 87 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 2.0e-44 | 1 | 90 | 90 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK66161.1 | 0 | 1 | 159 | 199 | 357 | pectate lyase [Fragaria x ananassa] |
| GenBank | ABR17791.1 | 0 | 1 | 127 | 242 | 368 | unknown [Picea sitchensis] |
| EMBL | CAB36835.1 | 0 | 1 | 159 | 205 | 363 | putative pectate lyase A11 (fragment) [Arabidopsis thaliana] |
| RefSeq | NP_567409.1 | 0 | 1 | 159 | 301 | 459 | pectate lyase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002526952.1 | 0 | 1 | 159 | 227 | 385 | Pectate lyase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 1 | 131 | 182 | 313 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 1 | 131 | 182 | 313 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1jta_A | 0.000000003 | 4 | 140 | 196 | 334 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1jrg_B | 0.000000003 | 4 | 140 | 196 | 334 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
| PDB | 1jrg_A | 0.000000003 | 4 | 140 | 196 | 334 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DR545572 | 219 | 1 | 185 | 0 |
| CO224551 | 219 | 1 | 185 | 0 |
| DR566702 | 219 | 1 | 185 | 0 |
| ES254900 | 219 | 1 | 185 | 0 |
| FD738211 | 219 | 1 | 185 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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