| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_61518g0010 |
| Family | GH28 |
| Protein Properties | Length: 359 Molecular Weight: 37346.7 Isoelectric Point: 4.392 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 179 | 346 | 0 |
| WIDVCDDCISVGNGSSNITIKDLTCGPGHGISVGSLGKWNSGGDVSNVLVDGAKLIATDNGLRIKTWQGGSGLASNIVFQNVQMVDTANPIIIDQYYCDS PEPCPNQTSAVKISDIKFKDISGTSATQVAVRLACSKQIPCTDILLSDISLTLSSGAEASSFCDNAVG | |||
| Full Sequence |
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| Protein Sequence Length: 359 Download |
| MATALPLGTR KHPHESDNLD SDKEAPSASA AQYYAISSDN LALVAKVVET ISSSGWIDVH 60 APTPLPSTTP SQPPAFAQQP TADPKHQPLA SAQTLEASEV LIPIPSAKSL HTPLEKEETN 120 DIIVATTLPP GTQKCPHESE NSDSNKEAPS TSAAQEYGIS SDNLALVAKV VEPISSSGWI 180 DVCDDCISVG NGSSNITIKD LTCGPGHGIS VGSLGKWNSG GDVSNVLVDG AKLIATDNGL 240 RIKTWQGGSG LASNIVFQNV QMVDTANPII IDQYYCDSPE PCPNQTSAVK ISDIKFKDIS 300 GTSATQVAVR LACSKQIPCT DILLSDISLT LSSGAEASSF CDNAVGQTKG TINPPSCLL 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02155 | PLN02155 | 5.0e-46 | 184 | 358 | 176 | + polygalacturonase | ||
| PLN02218 | PLN02218 | 3.0e-51 | 176 | 354 | 179 | + polygalacturonase ADPG | ||
| PLN02188 | PLN02188 | 2.0e-51 | 184 | 357 | 177 | + polygalacturonase/glycoside hydrolase family protein | ||
| pfam00295 | Glyco_hydro_28 | 3.0e-52 | 179 | 357 | 179 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02793 | PLN02793 | 4.0e-68 | 184 | 358 | 175 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK78768.1 | 0 | 184 | 355 | 203 | 374 | putative allergen Cup a 2 variant 1 [Hesperocyparis arizonica] |
| GenBank | ABK78769.1 | 0 | 184 | 355 | 203 | 374 | putative allergen Cup a 2 variant 2 [Hesperocyparis arizonica] |
| DDBJ | BAF32091.1 | 0 | 184 | 354 | 255 | 425 | pollen allergen [Cryptomeria japonica] |
| DDBJ | BAF32096.1 | 0 | 184 | 354 | 255 | 425 | pollen allergen [Cryptomeria japonica] |
| DDBJ | BAF32104.1 | 0 | 184 | 354 | 255 | 425 | pollen allergen [Cryptomeria japonica] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2iq7_G | 0.0000000000001 | 184 | 343 | 176 | 330 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2iq7_F | 0.0000000000001 | 184 | 343 | 176 | 330 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2iq7_E | 0.0000000000001 | 184 | 343 | 176 | 330 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2iq7_D | 0.0000000000001 | 184 | 343 | 176 | 330 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 2iq7_C | 0.0000000000001 | 184 | 343 | 176 | 330 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DN254233 | 174 | 185 | 358 | 0 |
| DR559173 | 114 | 246 | 359 | 0 |
| DR557895 | 114 | 246 | 359 | 0 |
| DV145325 | 176 | 184 | 359 | 0 |
| EH685542 | 177 | 184 | 359 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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