| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_61800g0010 |
| Family | PL1 |
| Protein Properties | Length: 248 Molecular Weight: 27273.8 Isoelectric Point: 8.1675 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 68 | 183 | 7.14662e-44 |
| LVRDSPGHYGWRSISDGDGISILGASNVWVDHCSLSSCTDGLIDATRGSTAITISNNFMTHHDKVMLLGHSDDYTQDVNMQVTVAFNHFGEGLVQRMPRC RHGNFHVVNNDYTHWG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 248 Download |
| MTAGAAIQIG KTIERGLQTA PLGSGEMPLE DRMGDSMWSQ IPMTTMQSIP GLAPCAMLLF 60 KRSLXNALVR DSPGHYGWRS ISDGDGISIL GASNVWVDHC SLSSCTDGLI DATRGSTAIT 120 ISNNFMTHHD KVMLLGHSDD YTQDVNMQVT VAFNHFGEGL VQRMPRCRHG NFHVVNNDYT 180 HWGIGRPDVE RGVLCSVGSG RIVELYEGFQ SRSEAVVSCR LHHSKSRRSD MQKRLSMLTS 240 AARRPRPP |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 1.0e-22 | 85 | 185 | 118 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| smart00656 | Amb_all | 5.0e-53 | 69 | 184 | 125 | + Amb_all domain. | ||
| pfam00544 | Pec_lyase_C | 2.0e-53 | 68 | 182 | 123 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM12784.1 | 0 | 66 | 182 | 183 | 299 | putative pectate-lyase [Capsicum annuum] |
| GenBank | ABK25017.1 | 0 | 66 | 182 | 217 | 333 | unknown [Picea sitchensis] |
| GenBank | ABO28477.1 | 0 | 66 | 182 | 187 | 303 | pectate lyase precursor [Glycine max] |
| GenBank | ABO28478.1 | 0 | 66 | 182 | 6 | 122 | pectate lyase precursor [Glycine max] |
| GenBank | ACU21247.1 | 0 | 66 | 182 | 187 | 303 | unknown [Glycine max] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 9e-34 | 83 | 184 | 149 | 250 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 9e-34 | 83 | 184 | 149 | 250 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pe9_B | 0.00000000000003 | 1 | 177 | 48 | 255 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pe9_A | 0.00000000000003 | 1 | 177 | 48 | 255 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1ooc_B | 0.00000000000003 | 1 | 177 | 48 | 255 | A Chain A, Mutations In The T1.5 Loop Of Pectate Lyase A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO201745 | 187 | 17 | 182 | 0 |
| ES250755 | 117 | 66 | 182 | 0 |
| CO481634 | 117 | 66 | 182 | 0 |
| CO481634 | 64 | 185 | 248 | 2e-19 |
| CO201745 | 59 | 14 | 72 | 0.00000000000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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