| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_6474333g0010 |
| Family | PL1 |
| Protein Properties | Length: 144 Molecular Weight: 15711.7 Isoelectric Point: 6.6398 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 2 | 144 | 8.40779e-44 |
| NSYKTIDGRGVNVHIANGPCITIQNVSHIIIHGIHVHDCKPAGNAMVRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAITIS NSYFTHHNEVMLLGHSDSYTPDVNMQVTIAYNHFGEGLKQRMP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 144 Download |
| MNSYKTIDGR GVNVHIANGP CITIQNVSHI IIHGIHVHDC KPAGNAMVRD SPTHYGWRTI 60 CDGDGISIFG GSHIWVDHVS LSNCADGLID AIMGSTAITI SNSYFTHHNE VMLLGHSDSY 120 TPDVNMQVTI AYNHFGEGLK QRMP |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 1.0e-15 | 41 | 144 | 114 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 4.0e-36 | 1 | 144 | 152 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 5.0e-42 | 1 | 144 | 153 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX88800.1 | 0 | 1 | 144 | 174 | 317 | ripening-related pectate lyase [Mangifera indica] |
| GenBank | ABR17909.1 | 0 | 1 | 144 | 166 | 309 | unknown [Picea sitchensis] |
| GenBank | ACF84425.1 | 0 | 1 | 144 | 11 | 154 | unknown [Zea mays] |
| GenBank | ACN35280.1 | 0 | 1 | 144 | 11 | 154 | unknown [Zea mays] |
| RefSeq | XP_002521130.1 | 0 | 1 | 144 | 178 | 321 | Pectate lyase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 9.99995e-41 | 4 | 144 | 89 | 231 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 9.99995e-41 | 4 | 144 | 89 | 231 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 0.0000000002 | 11 | 144 | 74 | 199 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1vbl_A | 0.00000001 | 6 | 144 | 135 | 287 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1pcl_A | 0.0000001 | 6 | 144 | 83 | 232 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CT580759 | 144 | 1 | 144 | 0 |
| GT257494 | 144 | 1 | 144 | 0 |
| CF399982 | 144 | 1 | 144 | 0 |
| CF390665 | 144 | 1 | 144 | 0 |
| FY842991 | 144 | 1 | 144 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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