Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_65469g0020 |
Family | GH35 |
Protein Properties | Length: 258 Molecular Weight: 29475 Isoelectric Point: 8.4258 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 258 | 0 |
LIINGHRKLLISGSIHYTRSTPEMWAGLIDKAKDGGLDVIETYVFWNMHEPQRGQYNFEGKLDLVKFVKLIHSKGLYVNLRIGPYIQSEWSYGGIPFWLH EIPGITFRTTNKPFKIEMKRFTKKIVDLMKREGLYASQGGPIILQQIENEYGRIADYFGEKGHSYINWAANMSVNLNTGVPWTMCKDADAPNYVINTCNG MYCGPLFTPNSDNAPKMWTENWTGWFS |
Full Sequence |
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Protein Sequence Length: 258 Download |
MYISLKAVVG FCLFVACIFA DGVYVGYDRT SLIINGHRKL LISGSIHYTR STPEMWAGLI 60 DKAKDGGLDV IETYVFWNMH EPQRGQYNFE GKLDLVKFVK LIHSKGLYVN LRIGPYIQSE 120 WSYGGIPFWL HEIPGITFRT TNKPFKIEMK RFTKKIVDLM KREGLYASQG GPIILQQIEN 180 EYGRIADYFG EKGHSYINWA ANMSVNLNTG VPWTMCKDAD APNYVINTCN GMYCGPLFTP 240 NSDNAPKMWT ENWTGWFS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06277 | PBP1_LacI_like_1 | 0.001 | 17 | 97 | 82 | + Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor. | ||
pfam02449 | Glyco_hydro_42 | 5.0e-7 | 54 | 183 | 144 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 9.0e-21 | 25 | 202 | 188 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-110 | 31 | 257 | 238 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 4.0e-113 | 25 | 258 | 234 | + beta-galactosidase; Provisional |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ86256.1 | 0 | 25 | 257 | 22 | 253 | unknown [Medicago truncatula] |
DDBJ | BAD20774.2 | 0 | 25 | 257 | 33 | 264 | beta-galactosidase [Raphanus sativus] |
EMBL | CBI21611.1 | 0 | 20 | 257 | 21 | 259 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002314274.1 | 0 | 22 | 257 | 29 | 263 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530296.1 | 0 | 13 | 257 | 10 | 256 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 1e-30 | 25 | 183 | 11 | 167 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3thd_C | 1e-30 | 25 | 183 | 11 | 167 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3thd_B | 1e-30 | 25 | 183 | 11 | 167 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3thd_A | 1e-30 | 25 | 183 | 11 | 167 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3thc_D | 1e-30 | 25 | 183 | 11 | 167 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |