| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_6752784g0010 |
| Family | PL1 |
| Protein Properties | Length: 150 Molecular Weight: 16550.3 Isoelectric Point: 6.5939 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 3 | 137 | 0 |
| RDSPGHYGWRTVSDGDGVSIFGASNIWVDHCSLSSCTDGLIDAIRGSTGITISNNFMTHHDKVMLLGHNDDYTQDVNMQVTVAFNHFGEGLVQRMPRCRH GYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 150 Download |
| MVRDSPGHYG WRTVSDGDGV SIFGASNIWV DHCSLSSCTD GLIDAIRGST GITISNNFMT 60 HHDKVMLLGH NDDYTQDVNM QVTVAFNHFG EGLVQRMPRC RHGYFHVVNN DYTHWEMYAI 120 GGSANPTINS QGNRFLAPVS RSSKEVSVAS |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 4.0e-21 | 18 | 135 | 130 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| smart00656 | Amb_all | 4.0e-59 | 2 | 138 | 146 | + Amb_all domain. | ||
| pfam00544 | Pec_lyase_C | 3.0e-60 | 1 | 135 | 143 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK25017.1 | 0 | 1 | 147 | 219 | 365 | unknown [Picea sitchensis] |
| GenBank | ABK92535.1 | 0 | 1 | 147 | 57 | 203 | unknown [Populus trichocarpa] |
| GenBank | ABO28478.1 | 0 | 1 | 147 | 8 | 154 | pectate lyase precursor [Glycine max] |
| GenBank | ACU21247.1 | 0 | 1 | 147 | 189 | 335 | unknown [Glycine max] |
| EMBL | CAN76500.1 | 0 | 2 | 147 | 187 | 332 | hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 16 | 147 | 149 | 280 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 16 | 147 | 149 | 280 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1jta_A | 0.00000000000005 | 24 | 148 | 151 | 300 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1jrg_B | 0.00000000000005 | 24 | 148 | 151 | 300 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
| PDB | 1jrg_A | 0.00000000000005 | 24 | 148 | 151 | 300 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO481634 | 147 | 1 | 147 | 0 |
| CO201745 | 147 | 1 | 147 | 0 |
| ES250755 | 147 | 1 | 147 | 0 |
| CO481108 | 147 | 1 | 147 | 0 |
| CF478684 | 147 | 1 | 147 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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