CAZyme Information

Basic Information
SpeciesPicea abies
Cazyme IDMA_67675g0010
FamilyCE8
Protein PropertiesLength: 557 Molecular Weight: 62048.5 Isoelectric Point: 8.0012
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CE82475480
  VIVSRDESSMSIQQAVNSAPDNSERRFVIRIKAGVYEEIVRIPSSKTNLMFVGDGMDRTVITGSMRVPSLPGVPSTYDSATVAVNADGFLARDIAFENAA
  GPGSHQAVALRVDSDLSSFYNCAFLGHQDTLYTHALRQFYRNCRIEGTVDFIFGNSAAIFENCLILVRPRQLKSSKGSSDPVTAHGRIDPAQPTGFVFHN
  CTINGTEEYMKNFYTHPKVYKVYLGRPWKMYSRVIFMNSYLGALISLKGWMPWRGDFALDTLYYGEFQNYGPGAKVSGRVPWSNQIPEINAGMYSIKSFI
  QG
Full Sequence
Protein Sequence     Length: 557     Download
MLLRVNIVAS LLLITILLLA LSAQLSAANY FSARRSHTKK LSIQKLFASH SVHLACQASQ    60
YPDLCKLSLQ ANSNISENAG PEEIIGAAVD LSSDETTRSY LHSKQLLTTS DNGNFTGAVK    120
DCLEYLQGSL RYIAKSRSQS LNPSNIKDVK IWLSAALSYQ YDCSSALKYV NTTQMVGRSM    180
QELVTVMNFT SNALSMVDAL DTYGKDMVIW RPPKTERSSN FSRTADYYHP THKIWDIFEV    240
DELVPDVIVS RDESSMSIQQ AVNSAPDNSE RRFVIRIKAG VYEEIVRIPS SKTNLMFVGD    300
GMDRTVITGS MRVPSLPGVP STYDSATVAV NADGFLARDI AFENAAGPGS HQAVALRVDS    360
DLSSFYNCAF LGHQDTLYTH ALRQFYRNCR IEGTVDFIFG NSAAIFENCL ILVRPRQLKS    420
SKGSSDPVTA HGRIDPAQPT GFVFHNCTIN GTEEYMKNFY THPKVYKVYL GRPWKMYSRV    480
IFMNSYLGAL ISLKGWMPWR GDFALDTLYY GEFQNYGPGA KVSGRVPWSN QIPEINAGMY    540
SIKSFIQGDE WLPSTIS 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PLN02506PLN025063.0e-11555555523+
PLN02468PLN024684.0e-11949555519+
PLN02201PLN022016.0e-124116555460+
pfam01095Pectinesterase3.0e-156246549309+
PLN02708PLN02708032555541+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABK24298.102355726559unknown [Picea sitchensis]
RefSeqXP_002281640.105255551554PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002306241.102955527557predicted protein [Populus trichocarpa]
RefSeqXP_002309906.105555559563predicted protein [Populus trichocarpa]
RefSeqXP_002517239.105555549551Pectinesterase-2 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1gq8_A02395551311A Chain A, Pectin Methylesterase From Carrot
PDB1xg2_A02435551307B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB1qjv_B2e-202465545340A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi
PDB1qjv_A2e-202465545340A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi
PDB2ntq_B2e-202465545340A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi
Transmembrane Domains
StartEnd
527
Signal Peptide
Cleavage Site
0
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO3685103131144260
EX4291642652935570
DV983671321683880
DR4751542862725570
EX3246742822765570
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_1260_00001.1Aquca_022_00312.1
Arabidopsis lyrata919784325521
Arabidopsis thalianaAT5G09760.1AT5G64640.1
Brachypodium distachyonBradi2g56820.1Bradi5g10700.1
Brassica rapaBra024317Bra028619Bra037786Bra006031Bra009401
Bra028617Bra009400Bra002149
Carica papayaevm.model.supercontig_42.121
Capsella rubellaCarubv10026126mCarubv10000564m
Citrus clementinaCiclev10025271m
Citrus sinensisorange1.1g009085m
Cucumis sativusCucsa.249950.1
Eucalyptus grandisEucgr.H04944.1
Fragaria vescamrna26037.1-v1.0-hybridmrna17879.1-v1.0-hybrid
Glycine maxGlyma05g32380.1Glyma08g15650.1Glyma06g15711.1
Gossypium raimondiiGorai.011G116400.1Gorai.003G067900.1Gorai.007G064900.1
Linum usitatissimumLus10013721Lus10033486Lus10020888Lus10005587
Malus domesticaMDP0000196867MDP0000200773MDP0000233370MDP0000297071MDP0000174996
MDP0000204084MDP0000173284MDP0000174791
Manihot esculentacassava4.1_006847mcassava4.1_004527mcassava4.1_004459mcassava4.1_021091mcassava4.1_005773m
Medicago truncatulaMedtr8g093460.1Medtr3g095920.1
Mimulus guttatusmgv1a004027mmgv1a008938mmgv1a007669mmgv1a003977mmgv1a019250m
Oryza sativaLOC_Os01g65790.1LOC_Os04g35770.1
Panicum virgatumPavirv00054696mPavirv00008464mPavirv00032807mPavirv00008364m
Physcomitrella patensPp1s382_22V6.1Pp1s216_42V6.1Pp1s151_23V6.2Pp1s76_125V6.1Pp1s151_23V6.1
Phaseolus vulgarisPhvul.002G270900.1Phvul.009G148900.1
Picea abiesMA_10430460g0010.462.762MA_10427058g0010.383.512MA_10427058g0010.383.512MA_10427058g0010.79.248MA_10427058g0010.79.248
MA_906551g0010MA_2253g0010MA_54974g0010MA_68362g0010MA_10430460g0010.462.762
MA_495624g0010
Populus trichocarpaPotri.005G061500.1Potri.007G107300.2Potri.007G107300.3Potri.007G107300.1
Prunus persicappa021056mppa024386mppa003915m
Ricinus communis30136.m001028
Setaria italicaSi005458mSi010057m
Selaginella moellendorffii8374476314420760
Sorghum bicolorSb06g017280.1Sb03g041680.1
Thellungiella halophilaThhalv10013067mThhalv10003853m
Vitis viniferaGSVIVT01026518001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)