Basic Information | |
---|---|
Species | Picea abies |
Cazyme ID | MA_68670g0010 |
Family | AA3 |
Protein Properties | Length: 455 Molecular Weight: 50304.8 Isoelectric Point: 7.1096 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA3 | 1 | 454 | 0 |
VLLLERGGLGHTLPIARKERGFIYNVLNTTPNDDPAQSFKSEDGVDNERGIVLGGSSTISAGFYSRAGLSYIRDSGWEESLVHQSYQWVEDSVVFRPALK QWQRTFRNGLLQAGAYPYNGYTLDHIEGTKVGGTTFDSRGLRHSSADLLEHASFNNLRVALRAKVSQILFSQAGERTTLKPKAYAVEYVDSVGNSHMALL NPDKGGEVIISCGALGSPQLLLLSGIGPREHLESLGIPVVIDFPGVGQGIADNPKVGITFLSPQLLEYSLPRIVGVNRGSFIESATISFHNPFNYDQEGT ERYAFNRLFGVNVVSIFELVAGPLSKGELRLRSRDFNEDPYVRFNYFSHPQDVKNCVEGLRIIKRVQETIPPSFFTRLFIGSLLPVNTSDDKALEAFCRM KFSTSWHYHGGCQVDSVVNDRYQVLGIDSLWVIDGSTFKRSPGSNPQATAMMLG |
Full Sequence |
---|
Protein Sequence Length: 455 Download |
VLLLERGGLG HTLPIARKER GFIYNVLNTT PNDDPAQSFK SEDGVDNERG IVLGGSSTIS 60 AGFYSRAGLS YIRDSGWEES LVHQSYQWVE DSVVFRPALK QWQRTFRNGL LQAGAYPYNG 120 YTLDHIEGTK VGGTTFDSRG LRHSSADLLE HASFNNLRVA LRAKVSQILF SQAGERTTLK 180 PKAYAVEYVD SVGNSHMALL NPDKGGEVII SCGALGSPQL LLLSGIGPRE HLESLGIPVV 240 IDFPGVGQGI ADNPKVGITF LSPQLLEYSL PRIVGVNRGS FIESATISFH NPFNYDQEGT 300 ERYAFNRLFG VNVVSIFELV AGPLSKGELR LRSRDFNEDP YVRFNYFSHP QDVKNCVEGL 360 RIIKRVQETI PPSFFTRLFI GSLLPVNTSD DKALEAFCRM KFSTSWHYHG GCQVDSVVND 420 RYQVLGIDSL WVIDGSTFKR SPGSNPQATA MMLGR |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 3.0e-31 | 49 | 454 | 480 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 3.0e-34 | 49 | 454 | 443 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PRK02106 | PRK02106 | 3.0e-36 | 112 | 454 | 397 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 4.0e-45 | 1 | 455 | 516 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 1.0e-148 | 1 | 455 | 499 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABE65766.1 | 0 | 1 | 455 | 78 | 540 | mandelonitrile lyase [Arabidopsis thaliana] |
GenBank | ABK25456.1 | 0 | 1 | 455 | 80 | 546 | unknown [Picea sitchensis] |
RefSeq | NP_177448.1 | 0 | 1 | 455 | 78 | 540 | (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative [Arabidopsis thaliana] |
RefSeq | XP_002277531.1 | 0 | 1 | 455 | 74 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 1 | 455 | 44 | 507 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 1 | 455 | 51 | 507 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3gdp_A | 0 | 1 | 455 | 51 | 507 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3gdn_B | 0 | 1 | 455 | 51 | 507 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 1 | 455 | 51 | 507 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 1 | 455 | 51 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO796743 | 496 | 1 | 455 | 0 |
GO876778 | 336 | 61 | 369 | 0 |
CO167807 | 302 | 42 | 335 | 0 |
DT561858 | 298 | 66 | 357 | 0 |
CO078158 | 260 | 28 | 286 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|