Basic Information | |
---|---|
Species | Picea abies |
Cazyme ID | MA_741127g0010 |
Family | GH19 |
Protein Properties | Length: 266 Molecular Weight: 28603.5 Isoelectric Point: 8.4134 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH19 | 62 | 266 | 0 |
VASIISDTFFNRIKAEISSACKGKAFYTYQGFITAANAFSNFGRTGTLEVRKRELAAFFANVARETGSLCYVEEISKPLYCTPSAVWPCKSGESYYGRGP LQLTGNYNYGEAGKYLGIDLLSNPDMVAQSPAIAFKTSIWYWSVYSNCHKAMTSTAGKGFAGTIRSINPGECGNPAYRSAVQSRVNYYEKFCSWLGVTTG PNLYC |
Full Sequence |
---|
Protein Sequence Length: 266 Download |
MLVLLAAEVQ VGSAQHCGCA EGQCCSKWGY CGTTKAYCGE GCQSGACYKK PPVSPAPTGT 60 GVASIISDTF FNRIKAEISS ACKGKAFYTY QGFITAANAF SNFGRTGTLE VRKRELAAFF 120 ANVARETGSL CYVEEISKPL YCTPSAVWPC KSGESYYGRG PLQLTGNYNY GEAGKYLGID 180 LLSNPDMVAQ SPAIAFKTSI WYWSVYSNCH KAMTSTAGKG FAGTIRSINP GECGNPAYRS 240 AVQSRVNYYE KFCSWLGVTT GPNLYC |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00270 | ChtBD1 | 2.0e-7 | 19 | 45 | 27 | + Chitin binding domain. | ||
COG3179 | COG3179 | 1.0e-8 | 111 | 234 | 159 | + Predicted chitinase [General function prediction only] | ||
cd00442 | lysozyme_like | 5.0e-9 | 149 | 204 | 56 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
pfam00182 | Glyco_hydro_19 | 2.0e-69 | 65 | 266 | 233 | + Chitinase class I. | ||
cd00325 | chitinase_glyco_hydro_19 | 2.0e-77 | 66 | 266 | 231 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17048.1 | 0 | 13 | 266 | 25 | 276 | class IV chitinase Chia4-Pa1.3 [Picea abies] |
GenBank | ABK22417.1 | 0 | 13 | 266 | 35 | 284 | unknown [Picea sitchensis] |
GenBank | ABK23018.1 | 0 | 13 | 266 | 35 | 284 | unknown [Picea sitchensis] |
GenBank | ABK23737.1 | 0 | 13 | 266 | 35 | 284 | unknown [Picea sitchensis] |
GenBank | ACN40402.1 | 0 | 13 | 266 | 35 | 284 | unknown [Picea sitchensis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hbh_A | 0 | 62 | 266 | 2 | 204 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
PDB | 3hbe_X | 0 | 62 | 266 | 2 | 204 | A Chain A, Structure Of The Family Gh92 Inverting Mannosidase Bt3990 From Bacteroides Thetaiotaomicron Vpi-5482 In Complex With Mannoimidazole |
PDB | 3hbd_A | 0 | 62 | 266 | 2 | 204 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 4dyg_B | 0 | 62 | 266 | 3 | 237 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 4dyg_A | 0 | 62 | 266 | 3 | 237 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |