Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_7513659g0010 |
Family | GT47 |
Protein Properties | Length: 224 Molecular Weight: 26970.8 Isoelectric Point: 8.0041 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 20 | 213 | 1.4e-37 |
LRVYVYDMPSKFTFDLLWLFHNTYQETANLTSNGSPHSIDYWLWADLIAPESERQLKTVVRVHRQEEADLFYIPFFTTISYFLLEKAECKQLYREALRWI KDQPAWHRSNGRDHILPVHHPWSFKSVRRSMKNAIWLLPDMDSTGNWYKPGDVWLEKDLILPYVPNTDFCDDACLAQSWSQRKTLLFFRGRLKR |
Full Sequence |
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Protein Sequence Length: 224 Download |
MWARERLELT EYHREGPFPL RVYVYDMPSK FTFDLLWLFH NTYQETANLT SNGSPHSIDY 60 WLWADLIAPE SERQLKTVVR VHRQEEADLF YIPFFTTISY FLLEKAECKQ LYREALRWIK 120 DQPAWHRSNG RDHILPVHHP WSFKSVRRSM KNAIWLLPDM DSTGNWYKPG DVWLEKDLIL 180 PYVPNTDFCD DACLAQSWSQ RKTLLFFRGR LKRNAVCMLT HSFY |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-31 | 19 | 209 | 195 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF06505.2 | 0 | 16 | 215 | 109 | 315 | Os01g0811400 [Oryza sativa Japonica Group] |
GenBank | EAY76230.1 | 0 | 16 | 215 | 110 | 316 | hypothetical protein OsI_04166 [Oryza sativa Indica Group] |
RefSeq | NP_001044591.1 | 0 | 16 | 215 | 109 | 315 | Os01g0811400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_197191.1 | 0 | 18 | 215 | 116 | 320 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002520033.1 | 0 | 18 | 215 | 117 | 321 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY294532 | 205 | 18 | 215 | 0 |
EY900949 | 207 | 16 | 215 | 0 |
EX131311 | 205 | 18 | 215 | 0 |
EL416206 | 204 | 19 | 215 | 0 |
CK290412 | 204 | 19 | 215 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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