Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_762g0010 |
Family | AA3 |
Protein Properties | Length: 439 Molecular Weight: 47944 Isoelectric Point: 6.3307 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 42 | 400 | 7.84727e-44 |
YIVVGGGTAGCPLAATLSTKYSVLVLERGGSPYGVPDIENADAFGKALDETDKYTSIAQTFTSEDGVSNVRARVLGGGTAINAGFYSRAGSEYVRSMGWD EGLVEESYEWVEKQNAFKPYQLSPWSSAIRNGLLEAGVLPYNGYTLDHLDGTKIGASTFDSKGKRHTAADLLRSANPDNIVVLLNATVSRILFNSLSEES KDGSTRKPRASGVEFMDRHGRSHQAFLSESSSTSEVILSAGALGSPQLLLLSGIGPSEHLKEFNIPLLLHSPLVGQRIQDNPGATLTWLSHEFYTIQVVG ILKASQNYIESVSIFVNGTLSPKGPNENRVYRDIIFEKLAFPLSRGELRLRSRDPRMED |
Full Sequence |
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Protein Sequence Length: 439 Download |
MASASAHAND IEQQSELLLF SGSDNTLSWR RNGRLPLGRN AYIVVGGGTA GCPLAATLST 60 KYSVLVLERG GSPYGVPDIE NADAFGKALD ETDKYTSIAQ TFTSEDGVSN VRARVLGGGT 120 AINAGFYSRA GSEYVRSMGW DEGLVEESYE WVEKQNAFKP YQLSPWSSAI RNGLLEAGVL 180 PYNGYTLDHL DGTKIGASTF DSKGKRHTAA DLLRSANPDN IVVLLNATVS RILFNSLSEE 240 SKDGSTRKPR ASGVEFMDRH GRSHQAFLSE SSSTSEVILS AGALGSPQLL LLSGIGPSEH 300 LKEFNIPLLL HSPLVGQRIQ DNPGATLTWL SHEFYTIQVV GILKASQNYI ESVSIFVNGT 360 LSPKGPNENR VYRDIIFEKL AFPLSRGELR LRSRDPRMED VKLGLWLTRD IRSMELSVSV 420 LWIPQRSETV LEPTLKPPL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 2.0e-24 | 42 | 396 | 435 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
PRK02106 | PRK02106 | 4.0e-28 | 42 | 321 | 328 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 2.0e-30 | 42 | 329 | 322 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 6.0e-124 | 42 | 395 | 391 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25456.1 | 0 | 39 | 397 | 55 | 429 | unknown [Picea sitchensis] |
EMBL | CBI34759.1 | 0 | 42 | 396 | 49 | 429 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282510.1 | 0 | 42 | 396 | 15 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312249.1 | 0 | 42 | 426 | 15 | 391 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315048.1 | 0 | 42 | 430 | 52 | 436 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ju2_B | 0 | 38 | 393 | 25 | 375 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1ju2_A | 0 | 38 | 393 | 25 | 375 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_B | 0 | 38 | 393 | 25 | 375 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_A | 0 | 38 | 393 | 25 | 375 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdn_B | 0 | 38 | 393 | 25 | 375 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO167807 | 293 | 105 | 397 | 0 |
DR385734 | 278 | 43 | 320 | 0 |
CV036145 | 264 | 99 | 362 | 0 |
FE521240 | 313 | 33 | 341 | 0 |
DR694364 | 283 | 104 | 386 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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