| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_90135g0010 |
| Family | GH28 |
| Protein Properties | Length: 436 Molecular Weight: 46895.5 Isoelectric Point: 8.2088 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 87 | 420 | 0 |
| KAACMAPSNAVLQVPSGKKFLVKPVTFLGPCKSHISVDIIGTIVAPKERSAWNSNELGLWLRFSGISGLTIEGGGVIDGQGQDWWSKSCKVNKQHVRVSF NCSAMSITGCSNVLIRNLHFVNSQRMHLVVVDSSEIQLTGLQIQAPKESPNTDGIHIQRVQNAQIDNCVIRTGDDCISISSGSSAINVKNINCGPGHGIS IGSLGKNGEGAKIDDILVQNITFIETSNGARIKTWQGGSGYARNIRFEDIVVDNVRNPIIIDQYYCDSTSPCKIQPSAVQIQDVTYRNIHGTSSTDVAVN FSCSETVACTGITMTNVKITSETADKAKSVCANA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 436 Download |
| MKQVSSAYPL QRGFDLRTFA MDFKSLTTFS SVVAIMALLM VDSGLATHRK VLRKSYSSAS 60 HIFNVMDYGA LGGGLNDDRT AFKEAWKAAC MAPSNAVLQV PSGKKFLVKP VTFLGPCKSH 120 ISVDIIGTIV APKERSAWNS NELGLWLRFS GISGLTIEGG GVIDGQGQDW WSKSCKVNKQ 180 HVRVSFNCSA MSITGCSNVL IRNLHFVNSQ RMHLVVVDSS EIQLTGLQIQ APKESPNTDG 240 IHIQRVQNAQ IDNCVIRTGD DCISISSGSS AINVKNINCG PGHGISIGSL GKNGEGAKID 300 DILVQNITFI ETSNGARIKT WQGGSGYARN IRFEDIVVDN VRNPIIIDQY YCDSTSPCKI 360 QPSAVQIQDV TYRNIHGTSS TDVAVNFSCS ETVACTGITM TNVKITSETA DKAKSVCANA 420 LGMASGTILP LSCLEN 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 1.0e-91 | 21 | 433 | 423 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN03003 | PLN03003 | 7.0e-94 | 58 | 435 | 384 | + Probable polygalacturonase At3g15720 | ||
| PLN03010 | PLN03010 | 6.0e-99 | 61 | 436 | 378 | + polygalacturonase | ||
| PLN02218 | PLN02218 | 6.0e-101 | 64 | 430 | 369 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 3.0e-130 | 25 | 434 | 419 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABM67700.1 | 0 | 21 | 434 | 4 | 425 | polygalacturonase [Citrus sinensis] |
| DDBJ | BAC57273.1 | 0 | 29 | 429 | 8 | 419 | putative polygalacturonase PG1 [Oryza sativa Japonica Group] |
| DDBJ | BAC57279.1 | 0 | 29 | 433 | 8 | 423 | putative polygalacturonase PG1 [Oryza sativa Japonica Group] |
| GenBank | EEC81719.1 | 0 | 29 | 433 | 8 | 423 | hypothetical protein OsI_25337 [Oryza sativa Indica Group] |
| RefSeq | XP_002466242.1 | 0 | 62 | 433 | 74 | 448 | hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 2e-22 | 157 | 416 | 113 | 372 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1rmg_A | 3e-19 | 59 | 422 | 17 | 355 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| PDB | 1nhc_F | 2e-17 | 144 | 420 | 60 | 334 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_E | 2e-17 | 144 | 420 | 60 | 334 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1nhc_D | 2e-17 | 144 | 420 | 60 | 334 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX438627 | 304 | 28 | 329 | 0 |
| DR050772 | 293 | 121 | 405 | 0 |
| EX314309 | 271 | 74 | 343 | 0 |
| EX368009 | 298 | 28 | 323 | 0 |
| DV987134 | 297 | 28 | 322 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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