Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_91467g0010 |
Family | PL1 |
Protein Properties | Length: 436 Molecular Weight: 48591.9 Isoelectric Point: 7.5757 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 148 | 355 | 0 |
AVIQTEPLWIIFQRDMVIQLKEELIMNSYKTIDGRGANIHIANGPCITVQYVKHIIIHGIHIHDCKPAGNAMVRDSPGHYGWRTISDGDGVSIFGASNIW VDHCSLSSCADGLIDAIMGSTAITISNNFMTHHDKVMLLGHNDDYTPDVNMQVTVAFNHFGERLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN SQGNRFLA |
Full Sequence |
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Protein Sequence Length: 436 Download |
MSGFRSVLPL LVLPWIFCIR SEASKTFEIF EKSTAAILGR PAAITATEHA EEPARKHVED 60 PERVVEMVER SINSSRRELS YLSCGTGNPI DDCWRCDPDW ENNRKRLADC AIGFGRNAIG 120 GQSGRFYLVT DPNDYDAVDP RPGTLRHAVI QTEPLWIIFQ RDMVIQLKEE LIMNSYKTID 180 GRGANIHIAN GPCITVQYVK HIIIHGIHIH DCKPAGNAMV RDSPGHYGWR TISDGDGVSI 240 FGASNIWVDH CSLSSCADGL IDAIMGSTAI TISNNFMTHH DKVMLLGHND DYTPDVNMQV 300 TVAFNHFGER LVQRMPRCRH GYFHVVNNDY THWEMYAIGG SANPTINSQG NRFLAPTNRF 360 SKEVTKREYT PQSVWRHWNW RSEGDLMLNG AFFIRSGAGA SSSYSKASSL SARPSSLVAS 420 LTGNAGVLTC RKGSRC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 2.0e-22 | 175 | 353 | 191 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 3.0e-68 | 168 | 353 | 209 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 3.0e-74 | 162 | 356 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25017.1 | 0 | 1 | 436 | 1 | 436 | unknown [Picea sitchensis] |
GenBank | ABR17766.1 | 0 | 5 | 436 | 4 | 426 | unknown [Picea sitchensis] |
GenBank | ADB90475.1 | 0 | 59 | 436 | 34 | 411 | pectate lyase [Gossypium herbaceum] |
GenBank | ADB90476.1 | 0 | 59 | 436 | 34 | 411 | pectate lyase [Gossypium raimondii] |
DDBJ | BAI94495.1 | 0 | 34 | 436 | 5 | 407 | pectate lyase [Dianthus caryophyllus] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 88 | 429 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 88 | 429 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 0.000000000000004 | 157 | 355 | 50 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1jta_A | 0.000000000000005 | 178 | 426 | 90 | 357 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1jrg_B | 0.000000000000005 | 178 | 426 | 90 | 357 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |