| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_9165956g0010 |
| Family | GH28 |
| Protein Properties | Length: 132 Molecular Weight: 14213.8 Isoelectric Point: 3.9502 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 3 | 93 | 6.9e-21 |
| VGWVKGVSFSNIQVSNVSVAINIDQYYCDKEICSNQTSAVAISDITYKKIRGTYIDTALYLACSDDVPCTDLNLIDIELRPVEDVSHESFC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 132 Download |
| GGVGWVKGVS FSNIQVSNVS VAINIDQYYC DKEICSNQTS AVAISDITYK KIRGTYIDTA 60 LYLACSDDVP CTDLNLIDIE LRPVEDVSHE SFCWSSYGQS EGPMQPDTAA ACLLAGTPRN 120 NLGNTDSTTE SC 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02188 | PLN02188 | 2.0e-10 | 11 | 82 | 74 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN02218 | PLN02218 | 4.0e-13 | 1 | 82 | 83 | + polygalacturonase ADPG | ||
| PLN02155 | PLN02155 | 1.0e-15 | 4 | 108 | 107 | + polygalacturonase | ||
| pfam00295 | Glyco_hydro_28 | 5.0e-18 | 1 | 81 | 82 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02793 | PLN02793 | 2.0e-27 | 1 | 106 | 108 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95830.1 | 2e-35 | 1 | 129 | 387 | 515 | unknown [Populus trichocarpa] |
| RefSeq | XP_002266099.1 | 6e-36 | 1 | 113 | 344 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314612.1 | 1e-35 | 1 | 129 | 253 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002335797.1 | 3e-35 | 1 | 113 | 37 | 152 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527898.1 | 4e-34 | 1 | 113 | 345 | 459 | Polygalacturonase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rmg_A | 0.00002 | 1 | 99 | 256 | 356 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO480795 | 132 | 1 | 132 | 0 |
| DV994598 | 132 | 1 | 132 | 0 |
| GE477751 | 132 | 1 | 132 | 0 |
| GT740156 | 132 | 1 | 132 | 0 |
| CO211064 | 132 | 1 | 132 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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