| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_9231294g0010 |
| Family | GH28 |
| Protein Properties | Length: 166 Molecular Weight: 17478.6 Isoelectric Point: 4.8488 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 1 | 162 | 0 |
| DDCISIVSGSANVKVEEILCGPGHGISVGSLGKDNSEAYVAAIVVDGATFSGTTNGLRIKTWQGGSGFAQGIRFQNILMDNVSNPIIIDQFYCDSSKGCK NQSSAVRVSEIVYMNVKGTSRTREAIKLACSDTVPCNNIILDNVDLQRADTGNAADSFCSSA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 166 Download |
| DDCISIVSGS ANVKVEEILC GPGHGISVGS LGKDNSEAYV AAIVVDGATF SGTTNGLRIK 60 TWQGGSGFAQ GIRFQNILMD NVSNPIIIDQ FYCDSSKGCK NQSSAVRVSE IVYMNVKGTS 120 RTREAIKLAC SDTVPCNNII LDNVDLQRAD TGNAADSFCS SAVGFR 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03003 | PLN03003 | 7.0e-48 | 1 | 154 | 156 | + Probable polygalacturonase At3g15720 | ||
| PLN02188 | PLN02188 | 5.0e-48 | 1 | 162 | 164 | + polygalacturonase/glycoside hydrolase family protein | ||
| pfam00295 | Glyco_hydro_28 | 2.0e-54 | 1 | 162 | 162 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
| PLN02218 | PLN02218 | 7.0e-57 | 1 | 147 | 147 | + polygalacturonase ADPG | ||
| PLN02793 | PLN02793 | 2.0e-70 | 1 | 164 | 164 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN65318.1 | 0 | 1 | 165 | 848 | 1010 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI28554.1 | 0 | 1 | 165 | 907 | 1069 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002299032.1 | 0 | 1 | 165 | 258 | 420 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317091.1 | 0 | 1 | 165 | 229 | 391 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002328587.1 | 0 | 1 | 165 | 259 | 421 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1bhe_A | 0.000000000002 | 1 | 146 | 223 | 361 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1rmg_A | 0.00000000001 | 1 | 164 | 197 | 355 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
| PDB | 1hg8_A | 0.0000000003 | 1 | 119 | 188 | 304 | A Chain A, Endopolygalacturonase From The Phytopathogenic Fungus Fusarium Moniliforme |
| PDB | 1czf_B | 0.0000000009 | 1 | 162 | 201 | 360 | A Chain A, Endo-Polygalacturonase Ii From Aspergillus Niger |
| PDB | 1czf_A | 0.0000000009 | 1 | 162 | 201 | 360 | A Chain A, Endo-Polygalacturonase Ii From Aspergillus Niger |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EH685542 | 166 | 1 | 166 | 0 |
| BG452808 | 165 | 1 | 165 | 0 |
| DV135677 | 165 | 1 | 165 | 0 |
| CB892670 | 165 | 1 | 165 | 0 |
| DN254233 | 164 | 2 | 165 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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