| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_9354042g0010 |
| Family | GH10 |
| Protein Properties | Length: 323 Molecular Weight: 36640.7 Isoelectric Point: 6.1182 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 50 | 238 | 9.69979e-42 |
| IVWEDPNYVMQWVKNLNAQQLQQAVENRVHSVVGRYRGQVIHWDVSNEMLHFSFFEDRLGPNGSANIFKLTQQLDSSTPMFMNDYNTIETCYDMVAIPDA YVRKLRDISRPGLIEGIVLESHFSKPNIPLVRSVLDKLGSTGLPIWLTEVDINNDVDQTTQAEYLEQVLREGFSHPAVGGIVIWSAWPY | |||
| Full Sequence |
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| Protein Sequence Length: 323 Download |
| MCVHNAQQSE QFVHCAVVLR TLSHSLFGAQ YFKLRLCRVI CVHLVDPANI VWEDPNYVMQ 60 WVKNLNAQQL QQAVENRVHS VVGRYRGQVI HWDVSNEMLH FSFFEDRLGP NGSANIFKLT 120 QQLDSSTPMF MNDYNTIETC YDMVAIPDAY VRKLRDISRP GLIEGIVLES HFSKPNIPLV 180 RSVLDKLGST GLPIWLTEVD INNDVDQTTQ AEYLEQVLRE GFSHPAVGGI VIWSAWPYPS 240 GCNRMCLIDN NFNNLPPGNM VDKLLEEWKS TGISGFTDES GTFRFSGFYG EYTVTVKHPG 300 ITATTTFKVS RPSEQPQHIN LLV |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11790 | Glyco_hydro_cc | 0.006 | 191 | 236 | 49 | + Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781. | ||
| pfam13620 | CarboxypepD_reg | 0.005 | 271 | 321 | 52 | + Carboxypeptidase regulatory-like domain. | ||
| COG3693 | XynA | 2.0e-17 | 49 | 256 | 240 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-32 | 49 | 253 | 226 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-59 | 49 | 261 | 234 | + Glycosyl hydrolase family 10. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001140909.1 | 0 | 44 | 321 | 282 | 558 | hypothetical protein LOC100272986 [Zea mays] |
| RefSeq | NP_001152556.1 | 0 | 49 | 321 | 290 | 563 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
| RefSeq | XP_002446197.1 | 0 | 49 | 321 | 291 | 563 | hypothetical protein SORBIDRAFT_06g003350 [Sorghum bicolor] |
| RefSeq | XP_002468186.1 | 0 | 44 | 321 | 282 | 558 | hypothetical protein SORBIDRAFT_01g041310 [Sorghum bicolor] |
| RefSeq | XP_002534153.1 | 0 | 49 | 321 | 200 | 471 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ta3_B | 0.0000000000002 | 61 | 233 | 93 | 268 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1nq6_A | 0.000000000002 | 61 | 261 | 91 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3nj3_B | 0.000000000007 | 44 | 267 | 97 | 338 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3nj3_A | 0.000000000007 | 44 | 267 | 97 | 338 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 3niy_B | 0.000000000007 | 44 | 267 | 97 | 338 | A Chain A, Crystal Structure Of Native Xylanase 10b From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DR556013 | 228 | 96 | 323 | 0 |
| CO479855 | 215 | 109 | 323 | 0 |
| GW769875 | 279 | 49 | 323 | 0 |
| DR554455 | 196 | 128 | 323 | 0 |
| CK442994 | 213 | 63 | 275 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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