Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_97947g0010 |
Family | PL1 |
Protein Properties | Length: 433 Molecular Weight: 47526.4 Isoelectric Point: 7.2083 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 134 | 329 | 0 |
QDDMVIQLKEELIMNSYKTIDGRGANVHIANGPCITVQYVTHIIIHGIHIHDCKPAGNAMVRDSPGHYGWRTISDGDGVSIFGASNIWVDHCSLSSCTDG LIDAIIGSTAITISNNFMTHHDKVMLLGHNDDYTQDVKMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLA |
Full Sequence |
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Protein Sequence Length: 433 Download |
MSGYPSVVAL FVLLWIFCIR SEAGKSFGIF KKRTGPVVVP ETKHGQQPAT KYVEEPERVV 60 EMVERSINSS RRQLSYLSCG TGNPIDDCWR CDSDWENNRK RLADCAIGFG RNAIGGRNGR 120 LYVVTDPNDY DALQDDMVIQ LKEELIMNSY KTIDGRGANV HIANGPCITV QYVTHIIIHG 180 IHIHDCKPAG NAMVRDSPGH YGWRTISDGD GVSIFGASNI WVDHCSLSSC TDGLIDAIIG 240 STAITISNNF MTHHDKVMLL GHNDDYTQDV KMQVTVAFNH FGEGLVQRMP RCRHGYFHVV 300 NNDYTHWEMY AIGGSANPTI NSQGNRFLAP VDYAIGGSAN PTINSQGNRF LAPVDRSAKE 360 VTKHENSPES VWRQWNWRSD GDQMLNGAFF TPSGAGASSS YAKASSLSAR PSSLVASLTG 420 NAGVLTCRKG SPC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 3.0e-21 | 149 | 347 | 211 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 3.0e-67 | 142 | 327 | 209 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 1.0e-71 | 136 | 330 | 206 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25017.1 | 0 | 1 | 433 | 1 | 436 | unknown [Picea sitchensis] |
EMBL | CAN76500.1 | 0 | 49 | 433 | 21 | 403 | hypothetical protein [Vitis vinifera] |
EMBL | CBI14899.1 | 0 | 49 | 433 | 21 | 403 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275781.1 | 0 | 49 | 433 | 76 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526952.1 | 0 | 53 | 433 | 27 | 396 | Pectate lyase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 83 | 426 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 83 | 426 | 2 | 346 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1jta_A | 0.00000000000002 | 152 | 423 | 90 | 357 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1jrg_B | 0.00000000000002 | 152 | 423 | 90 | 357 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |
PDB | 1jrg_A | 0.00000000000002 | 152 | 423 | 90 | 357 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |