y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000035240 |
Family | GT21 |
Protein Properties | Length: 525 Molecular Weight: 59570 Isoelectric Point: 8.6049 |
Chromosome | Chromosome/Scaffold: 022288177 Start: 1995 End: 6280 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT21 | 84 | 256 | 1.5e-30 |
PRVTVVMPLKGFGEHNLHNWRTQVTSLYGGHLEFMFIVESTEDPAYHAVSMLLSELKDEVNAKIVVAGISTTCSQKIHNQLIGVEKMHKASKYVLFLDDD VRLHPGSIGALTTEMEKNPDIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMGFATGGRTFFLWGGCMMMHADDF |
Full Sequence |
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Protein Sequence Length: 525 Download |
MSALDPLDSL LFSLSRAFCS PLAVFVQIQG CLICLLLAFG WACAAYVRNR EINRMKDSMQ 60 RGNSFAFLCH DITELEHSNQ LKLPRVTVVM PLKGFGEHNL HNWRTQVTSL YGGHLEFMFI 120 VESTEDPAYH AVSMLLSELK DEVNAKIVVA GISTTCSQKI HNQLIGVEKM HKASKYVLFL 180 DDDVRLHPGS IGALTTEMEK NPDIFIQTGY PLDLPSGSLG SYCIYEYHMP CSMGFATGGR 240 TFFLWGGCMM MHADDFRLNR YGVVXXXXXG XYXXXXTXXX XAXXXPIHLC GAHKRLITSP 300 PVAVFPHPLA SDLTFPRYWN YLRKQTFVLE SYTTTVNWIM NRALFTVHCY LSWGFVAPFL 360 MAIIHITAAL RMYIKGYSIE ETTFTFRLKL VGCLATCTII ELLSMWNLTR IEVHLCNMLS 420 PEAXKLSLAT YNWSLVFIAL IVDNFLYPVS AFRSHFSQSI NWSGIRYHLK DGKIFKIERS 480 KDMGPVYTDL GGKHLGKKGA PPKLSFLSSL ARSLAQWRQP KKYDI 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03472 | HpnI | 0.002 | 84 | 208 | 127 | + hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopanoid biosynthesis locus was described consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and another radical SAM enzyme (ZMO0874), HpnH. Although discontinuous in Z. mobilis, we continue the gene symbol sequence with HpnIJKL. Hopanoids are known to feature polar glycosyl head groups in many organisms. | ||
cd04186 | GT_2_like_c | 6.0e-5 | 161 | 257 | 97 | + Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. | ||
COG1215 | COG1215 | 3.0e-6 | 79 | 250 | 178 | + Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | ||
cd02520 | Glucosylceramide_synthase | 5.0e-7 | 84 | 204 | 124 | + Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment. | ||
pfam13506 | Glyco_transf_21 | 4.0e-9 | 147 | 262 | 117 | + Glycosyl transferase family 21. This is a family of ceramide beta-glucosyltransferases - EC:2.4.1.80. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK73021.1 | 0 | 2 | 525 | 3 | 520 | AF367245_1 ceramide glucosyltransferase [Gossypium arboreum] |
GenBank | AAL11579.1 | 0 | 1 | 525 | 1 | 519 | AF424585_1 At2g19880/F6F22.9 [Arabidopsis thaliana] |
GenBank | ABK95617.1 | 0 | 5 | 525 | 3 | 517 | unknown [Populus trichocarpa] |
RefSeq | NP_565460.1 | 0 | 1 | 525 | 1 | 519 | ceramide glucosyltransferase, putative [Arabidopsis thaliana] |
RefSeq | XP_002514215.1 | 0 | 2 | 524 | 5 | 521 | ceramide glucosyltransferase, putative [Ricinus communis] |