| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000055078 |
| Family | GH51 |
| Protein Properties | Length: 672 Molecular Weight: 73698.4 Isoelectric Point: 5.0133 |
| Chromosome | Chromosome/Scaffold: 012139232 Start: 12538 End: 20687 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 206 | 659 | 0 |
| TNPNSRLQLTTTSKGVIWFDQVSAIPLDTYKGHGFRKDLVQMLADLKPRFFRFPGGCFVEGEWLRNAFRWKETIGPWEERPGHFGDVWMYWTDDGLGYFE FLQLSEDLGSLPIWVFNNGISHNDQVDTSSVLPFVQEALDGIEFARGSPNSTWGSLRAAMGHPEPFDLRYVAIGNEDCGKKNYRGNYLKFYSAIRNAYPD IKMISNCDGSSRQLDHPADMYDFHIYTSASNLFSMANHFDHTSRNGPKAFVSEYAVTGKDAGRGSLLAALAEAGFLIGLEKNSDIVEMASYAPLFVNTHD RRWNPDAIVFDSSQLYGTPSYWVQCLFNESSGATLYNSTLQXNSSTSLLASAISWQNSENENTYLRIKVVNLGTYTVNLKVFVDGLEPNSVSLSGSTKTV LTSNNQMDENSFNEPKKVIPKRSLLESAGEEMEVVISPRSFTSIDLLMESSDVI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 672 Download |
| MGSCKSPHVV LLLHVLLCSV YRCFAIGVDA NQTANLLIDA SQASARPISD TLFGIFFEEI 60 NHAGAGGVWA ELVSNRAGGP NTPSNIDPWA IIGNESSLIV STDRSSCFDR NKVALRMEVL 120 CDTQGANSCP AGGVGIYNPG FWGMNIEKGK TYNAVLYVRS SGSINVSVSL TGSDGLQKLA 180 AANIIASGSE VSNWTKFEVQ LKAQGTNPNS RLQLTTTSKG VIWFDQVSAI PLDTYKGHGF 240 RKDLVQMLAD LKPRFFRFPG GCFVEGEWLR NAFRWKETIG PWEERPGHFG DVWMYWTDDG 300 LGYFEFLQLS EDLGSLPIWV FNNGISHNDQ VDTSSVLPFV QEALDGIEFA RGSPNSTWGS 360 LRAAMGHPEP FDLRYVAIGN EDCGKKNYRG NYLKFYSAIR NAYPDIKMIS NCDGSSRQLD 420 HPADMYDFHI YTSASNLFSM ANHFDHTSRN GPKAFVSEYA VTGKDAGRGS LLAALAEAGF 480 LIGLEKNSDI VEMASYAPLF VNTHDRRWNP DAIVFDSSQL YGTPSYWVQC LFNESSGATL 540 YNSTLQXNSS TSLLASAISW QNSENENTYL RIKVVNLGTY TVNLKVFVDG LEPNSVSLSG 600 STKTVLTSNN QMDENSFNEP KKVIPKRSLL ESAGEEMEVV ISPRSFTSID LLMESSDVIR 660 TTGADSVSVS SI 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.002 | 146 | 216 | 74 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3534 | AbfA | 3.0e-34 | 239 | 651 | 480 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-38 | 457 | 645 | 202 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 4.0e-48 | 457 | 645 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 1 | 672 | 1 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 1 | 672 | 1 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 1 | 672 | 1 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAC99303.1 | 0 | 1 | 672 | 1 | 674 | alpha-L-arabinofuranosidase [Pyrus pyrifolia] |
| DDBJ | BAF42035.1 | 0 | 1 | 672 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 8e-20 | 239 | 549 | 48 | 370 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 8e-20 | 239 | 549 | 48 | 370 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 8e-20 | 239 | 549 | 48 | 370 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 8e-20 | 239 | 549 | 48 | 370 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 8e-20 | 239 | 549 | 48 | 370 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
