| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000122981 |
| Family | GT5 |
| Protein Properties | Length: 656 Molecular Weight: 71530.4 Isoelectric Point: 6.5111 |
| Chromosome | Chromosome/Scaffold: 006675304 Start: 21908 End: 26277 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 135 | 645 | 0 |
| NVVFVSAEAAPYSKTGGLGDVCGSLPIVLAARGHRVMVVSPRYQNGTAADRKYSGAVDLETRVKVYCFGAEQEVSFYHEYRAGVDWVFVDHPSYHRPGSP YGDSLGAFDDNQFRFTLLCHAACEAPLVLPLGGFTYGEKSLFIVNDWHAGLVPLLLAAKYRPYGVYKDARSILVIHNLAHQGVEPGVTYKNLGLPAEWYG ALEWVFPTWARAHALDKGEAVNILKGAIVTSDRILTVSEGYSWEITTVEGGYGLNELLSSRKSVLTGITNGVDVVEWNPSTDVHTASHYSADDLSGKVAK STILRWGVMVQCKLALQKELGLPLRPDCPLIGFVGRLDYQKGIDLIQSGMPQLMEDDVQFVMLGSGDPVCEDWMRATEATYKDKFRGWVGFNVPVSHRIT AGCDILLMPSRFEPCGLNQLYAMRYGTVPVVHSTGGLRDTVVNFNPYAQGGKGDGTGWTFSPLTKESMLAALKLACRTFREYKPSWEGLMKRGMERDFTW ESAAIKYERVF | |||
| Full Sequence |
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| Protein Sequence Length: 656 Download |
| MGSLKFTSLI PCKSSSLIPI PNKYANHEAI GQLGFAPLWK RRGAACLRLR ASVAGGSGGG 60 GQDGASAVED QQKDGKGVFL GAERDGSGAV IGFNLIPPNG ELNVIDSPED VSSVRGEESV 120 EIDGKEISKA SVTYNVVFVS AEAAPYSKTG GLGDVCGSLP IVLAARGHRV MVVSPRYQNG 180 TAADRKYSGA VDLETRVKVY CFGAEQEVSF YHEYRAGVDW VFVDHPSYHR PGSPYGDSLG 240 AFDDNQFRFT LLCHAACEAP LVLPLGGFTY GEKSLFIVND WHAGLVPLLL AAKYRPYGVY 300 KDARSILVIH NLAHQGVEPG VTYKNLGLPA EWYGALEWVF PTWARAHALD KGEAVNILKG 360 AIVTSDRILT VSEGYSWEIT TVEGGYGLNE LLSSRKSVLT GITNGVDVVE WNPSTDVHTA 420 SHYSADDLSG KVAKSTILRW GVMVQCKLAL QKELGLPLRP DCPLIGFVGR LDYQKGIDLI 480 QSGMPQLMED DVQFVMLGSG DPVCEDWMRA TEATYKDKFR GWVGFNVPVS HRITAGCDIL 540 LMPSRFEPCG LNQLYAMRYG TVPVVHSTGG LRDTVVNFNP YAQGGKGDGT GWTFSPLTKE 600 SMLAALKLAC RTFREYKPSW EGLMKRGMER DFTWESAAIK YERVFGWAFI DPPYVK 660 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 6.0e-97 | 136 | 645 | 525 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-136 | 135 | 654 | 526 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 8.0e-171 | 135 | 645 | 518 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 135 | 645 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 135 | 645 | 512 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV25893.1 | 0 | 1 | 655 | 1 | 632 | starch synthase isoform I [Manihot esculenta] |
| EMBL | CBI23015.1 | 0 | 78 | 655 | 1 | 567 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197818.1 | 0 | 22 | 655 | 19 | 651 | SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1); starch synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002277372.1 | 0 | 14 | 655 | 11 | 632 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321996.1 | 0 | 32 | 656 | 33 | 649 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 135 | 645 | 11 | 508 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
| PDB | 3vue_A | 0 | 135 | 645 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 135 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 135 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 135 | 645 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO595058 | 504 | 151 | 654 | 0 |
| HO581986 | 380 | 244 | 622 | 0 |
| GO872237 | 359 | 295 | 653 | 0 |
| DV161524 | 322 | 111 | 432 | 0 |
| HO581986 | 34 | 621 | 654 | 0.001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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