| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000123530 |
| Family | CE8 |
| Protein Properties | Length: 370 Molecular Weight: 40468.6 Isoelectric Point: 9.5959 |
| Chromosome | Chromosome/Scaffold: 007527239 Start: 3121 End: 4788 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 73 | 357 | 0 |
| KVMQDGKGNFKTVTDAINSIPAGNTKRVIVYIGSGEYKEKITIPRNKPFVTLYGSPTNMPILTFDGTAQKYGTVNSATVIAESDYFVAANLIIKNSSPRP DGKRVGAQAVALRVSGNKAALYNCKLFGFQDTLCDDRGNHLFKDCYIEGTVDFIWGSGKSLYLNXELHVLGDNGITVITAQARDSDSEDTGYSFVHCKIT GTGIGTYLGRAWRARPQVVYAYTNMTKVVNPAGWSNDNHSERDKTVSYGEYKCMGPGSSKNNKRNLSKELTDEQAKRFISLGYIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 370 Download |
| MAGKNKCMVV HAALIMTILL SATIAMADDN TPVPAALSQV NTWFNNNVKP YTQRQKTLDP 60 AVVTAEAGQK VIKVMQDGKG NFKTVTDAIN SIPAGNTKRV IVYIGSGEYK EKITIPRNKP 120 FVTLYGSPTN MPILTFDGTA QKYGTVNSAT VIAESDYFVA ANLIIKNSSP RPDGKRVGAQ 180 AVALRVSGNK AALYNCKLFG FQDTLCDDRG NHLFKDCYIE GTVDFIWGSG KSLYLNXELH 240 VLGDNGITVI TAQARDSDSE DTGYSFVHCK ITGTGIGTYL GRAWRARPQV VYAYTNMTKV 300 VNPAGWSNDN HSERDKTVSY GEYKCMGPGS SKNNKRNLSK ELTDEQAKRF ISLGYIQGSK 360 WLLPPXNPKV 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 1.0e-83 | 70 | 370 | 317 | + pectinesterase | ||
| PLN02304 | PLN02304 | 4.0e-85 | 74 | 364 | 299 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 3.0e-89 | 71 | 362 | 292 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-110 | 71 | 364 | 302 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 9 | 367 | 359 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38547.1 | 0 | 9 | 365 | 5 | 362 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277202.1 | 0 | 28 | 365 | 26 | 363 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309337.1 | 0 | 15 | 367 | 15 | 368 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 9 | 367 | 6 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333446.1 | 0 | 7 | 367 | 4 | 365 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 6e-39 | 72 | 368 | 9 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-35 | 74 | 362 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 6e-23 | 71 | 350 | 8 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 6e-23 | 71 | 350 | 8 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 6e-23 | 71 | 350 | 8 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
