Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000132261 |
Family | GH10 |
Protein Properties | Length: 636 Molecular Weight: 71920.2 Isoelectric Point: 6.4268 |
Chromosome | Chromosome/Scaffold: 021505235 Start: 13714 End: 17578 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 284 | 544 | 0 |
VKSHFPFGCGMNHYILTNSDYQKWFASRFKWTTFTNEMKWYSTEKARGQENYTIADNMVKFAQKNGISIRGHNVFWDDPKYQPDWVKSLSPEEVRTAAAK RINSVVSRYQGQLIAWDVVNENLHFSFYEDNLGENASAEFYSTAQQLDPDTTMFMNEYNTMEYSSDEKSSPANYKKKLEEILSYPRNENLSLGIGLQGHF GSGQPNLAXMRSTLDMLGAIGLPIWLTEVDVEKDPNQAQYLEEVLREGYSHPAVQGIIMFV |
Full Sequence |
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Protein Sequence Length: 636 Download |
MQMNPKKTLE KVHEVQMLVE LKNNFTKSVC NHFKALPNEL HDNLQLCVVE MSLPVRSTLD 60 LTSLYANTED NSRGTMKLCK LSSQLLPLLP VLQCLVEPLD ALYGGGIIVN PEFNYNIERW 120 EAFGKGKIEE RISKKGNRFM VAHSRKHPLD SFSQKVCVEK GKIYSFSASV QVSEGSGIVA 180 VVFKFPNRDA VRGGDVIAEH GCWTLLKGGF VANFTSPVEI LFESKNTSVE IMVDNVSLQP 240 FTKEEWRSHQ DKSIKELRKS KVRFHVTQAS KNPLNGTKVS IKQVKSHFPF GCGMNHYILT 300 NSDYQKWFAS RFKWTTFTNE MKWYSTEKAR GQENYTIADN MVKFAQKNGI SIRGHNVFWD 360 DPKYQPDWVK SLSPEEVRTA AAKRINSVVS RYQGQLIAWD VVNENLHFSF YEDNLGENAS 420 AEFYSTAQQL DPDTTMFMNE YNTMEYSSDE KSSPANYKKK LEEILSYPRN ENLSLGIGLQ 480 GHFGSGQPNL AXMRSTLDML GAIGLPIWLT EVDVEKDPNQ AQYLEEVLRE GYSHPAVQGI 540 IMFVGPEIAG FNVTTLVDKN FKNTPAGDVV DKLIEEWNSN TQEIIADDQG YIDVSLFHGD 600 YEITAEGRVA NTSATLSLRV ARAHEPQAIV HVHIDT |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 7.0e-36 | 296 | 566 | 302 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 7.0e-59 | 280 | 570 | 315 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 1.0e-80 | 321 | 570 | 272 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 93 | 622 | 39 | 568 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 93 | 635 | 33 | 574 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 93 | 623 | 4 | 534 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 94 | 635 | 8 | 549 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 93 | 620 | 22 | 549 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xas_A | 2e-27 | 290 | 518 | 16 | 243 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1e0v_A | 3e-27 | 290 | 518 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0n_A | 3e-27 | 290 | 518 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0m_A | 3e-27 | 290 | 518 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0l_A | 3e-27 | 290 | 518 | 16 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV141191 | 250 | 279 | 528 | 0 |
ES830806 | 292 | 170 | 459 | 0 |
DV134092 | 258 | 118 | 375 | 0 |
DV156862 | 248 | 126 | 373 | 0 |
CV887102 | 263 | 372 | 634 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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