| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000133066 |
| Family | GT30 |
| Protein Properties | Length: 442 Molecular Weight: 49151.4 Isoelectric Point: 9.53 |
| Chromosome | Chromosome/Scaffold: 02331290 Start: 7534 End: 11588 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT30 | 41 | 220 | 0 |
| RWPERLGRPSLPRPEGPLIWFHAVSLGEGMAAIPVIKQCIQRRPDLTILMTTTTSSAFGVIEKLLPTGVLHQFSPVDTPSAVDSFLGYWKPNVIVLMESE LWPNLIMAASEKGIMLALLNARVSTKSFKRWSGPVLLPLISLMLSKFSLISPLSNMQAIHFQLLHAPPFVINFSGDLKYV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 442 Download |
| MAATKSKAVY NVYRALTHGL SPLLYLHLHW RKLXGLEHPL RWPERLGRPS LPRPEGPLIW 60 FHAVSLGEGM AAIPVIKQCI QRRPDLTILM TTTTSSAFGV IEKLLPTGVL HQFSPVDTPS 120 AVDSFLGYWK PNVIVLMESE LWPNLIMAAS EKGIMLALLN ARVSTKSFKR WSGPVLLPLI 180 SLMLSKFSLI SPLSNMQAIH FQLLHAPPFV INFSGDLKYV VGEFDISEGE IKNMQDLKVH 240 CAHRKVWMAS SIHKGEEEVI LGIHKVLRQE YPDLLTIIVP RHPQHGKEIA QKLWKEGHGV 300 ALRSQRDKLL GDTSIYVVDT LGELKHLYKL SPIAVIGGSF FPSLSGHNIS EAAAAGCATL 360 TGPYIGHFSI MVLEMQRLNP LSVLQVGGKL ELEEALRKLF SDVKVLEAHC AAAKQVYHTL 420 SSGVVQNVWN LLDIQILQRA LS |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam04413 | Glycos_transf_N | 6.0e-61 | 38 | 219 | 184 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. |
| COG1519 | KdtA | 1.0e-106 | 11 | 436 | 429 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] |
| PRK05749 | PRK05749 | 1.0e-113 | 12 | 439 | 435 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE80128.2 | 0 | 8 | 417 | 6 | 415 | Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] |
| EMBL | CBI30224.1 | 0 | 1 | 387 | 1 | 387 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277784.1 | 0 | 1 | 442 | 1 | 441 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322900.1 | 0 | 1 | 441 | 3 | 442 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 0 | 2 | 438 | 6 | 441 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 2e-21 | 48 | 364 | 33 | 310 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 2xcu_C | 2e-21 | 48 | 364 | 33 | 310 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 2xcu_B | 2e-21 | 48 | 364 | 33 | 310 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 2xcu_A | 2e-21 | 48 | 364 | 33 | 310 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 2xci_D | 2e-21 | 48 | 364 | 33 | 310 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY266328 | 360 | 9 | 368 | 0 |
| DY279419 | 317 | 30 | 346 | 0 |
| DY288817 | 361 | 9 | 368 | 0 |
| FC917851 | 311 | 30 | 340 | 0 |
| DY279419 | 60 | 340 | 399 | 3.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |