Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000144523 |
Family | GH10 |
Protein Properties | Length: 453 Molecular Weight: 50222.2 Isoelectric Point: 5.1199 |
Chromosome | Chromosome/Scaffold: 021505238 Start: 3378 End: 5151 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 100 | 364 | 0 |
KAPGFPFGVAVNKNILTNTAYQNWFTSKPFKVTTFEDEMKWYTMEPSPGQEDYSAADALVQFAKQHQIAVRGHNVFWEDPDYQAGWLNSLSGQQFSDAAN KRLNSIMGRYKGQVIAWDVSNENLHFNFFESKMGATASAEFYNWASKADDTATLFLNDYNTIEESGDKDSIPAKYLQKLRDIQGFPGNSNAKMAIGLESH FQTPNIPYIRSYIDTLAGANVPIWITELDVVSGPNQASYLEQILREVHSHPKIQGIVIWAAWKPS |
Full Sequence |
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Protein Sequence Length: 453 Download |
MFPVCVGAAG IQVSSSSAPS MLKGGLTVNA SGPAELYFES ENTSVEIFVD SISLQPFTQK 60 QWNSHQQQSI EKVRKTNVRI QAVTEQGNPL ENATIIIQQK APGFPFGVAV NKNILTNTAY 120 QNWFTSKPFK VTTFEDEMKW YTMEPSPGQE DYSAADALVQ FAKQHQIAVR GHNVFWEDPD 180 YQAGWLNSLS GQQFSDAANK RLNSIMGRYK GQVIAWDVSN ENLHFNFFES KMGATASAEF 240 YNWASKADDT ATLFLNDYNT IEESGDKDSI PAKYLQKLRD IQGFPGNSNA KMAIGLESHF 300 QTPNIPYIRS YIDTLAGANV PIWITELDVV SGPNQASYLE QILREVHSHP KIQGIVIWAA 360 WKPSGCYRMC LTDNNFKNLP TGDVVDKLTS EFGLTSGLAS GTTNANGFFE ASLFHGDYEV 420 KITHPLVDSP FVRGLNVAPT TESQQQLHVQ LNA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 5.0e-34 | 99 | 353 | 266 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 4.0e-49 | 104 | 377 | 301 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 1.0e-71 | 138 | 385 | 272 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 9 | 425 | 137 | 553 | endoxylanase [Carica papaya] |
RefSeq | NP_195110.3 | 0 | 9 | 446 | 130 | 567 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002264605.1 | 0 | 9 | 446 | 132 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 20 | 424 | 111 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 9 | 451 | 128 | 566 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xas_A | 1e-25 | 103 | 358 | 13 | 266 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1e0v_A | 2e-25 | 103 | 359 | 13 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1nq6_A | 2e-25 | 106 | 385 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0n_A | 2e-25 | 103 | 359 | 13 | 267 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1v0m_A | 2e-25 | 103 | 359 | 13 | 267 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266128 | 277 | 119 | 393 | 0 |
AM722845 | 268 | 70 | 336 | 0 |
FL854687 | 247 | 192 | 437 | 0 |
FL870567 | 250 | 193 | 441 | 0 |
EX266128 | 27 | 401 | 425 | 0.39 |
Sequence Alignments (This image is cropped. Click for full image.) |
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