| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000146743 |
| Family | CE8 |
| Protein Properties | Length: 361 Molecular Weight: 40395.1 Isoelectric Point: 6.7685 |
| Chromosome | Chromosome/Scaffold: 001718171 Start: 3879 End: 5872 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 63 | 355 | 0 |
| IVVDKNGGGDSLTVQGAVDMVPEQNTERIKIYILPGIYREKVLVPISKPYISFIGNQXNTSETVITWNNKASDKDGTGCELGTYRTASVAIEADYFCATG ITFENTVVAVPGGYGMQAVALRVAGDKAMFYRVRVLGTQDTLLDETGSHYFYHCHIQGNVDFIFGRSRSLYQECVIQSTAENSGAIAAHHRDSPYEDTGF SFVNCKIIGTGYIYLGRAWGNYSRAVYSYCHFDDIITPPGWSDWNYPSRQKTVDFGEYKCRGRGAERSGRVPWLKSFSLEEIRPFLDTKFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MGFSVLGVCV GGFVLFFLGG IKVGFSQSES FARNYISWDD LKVDDRKLGL NTKEERVNXS 60 RIIVVDKNGG GDSLTVQGAV DMVPEQNTER IKIYILPGIY REKVLVPISK PYISFIGNQX 120 NTSETVITWN NKASDKDGTG CELGTYRTAS VAIEADYFCA TGITFENTVV AVPGGYGMQA 180 VALRVAGDKA MFYRVRVLGT QDTLLDETGS HYFYHCHIQG NVDFIFGRSR SLYQECVIQS 240 TAENSGAIAA HHRDSPYEDT GFSFVNCKII GTGYIYLGRA WGNYSRAVYS YCHFDDIITP 300 PGWSDWNYPS RQKTVDFGEY KCRGRGAERS GRVPWLKSFS LEEIRPFLDT KFISGEQWLR 360 L 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 1.0e-101 | 31 | 359 | 332 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 8.0e-104 | 62 | 360 | 299 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 5.0e-111 | 61 | 359 | 301 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 9.0e-122 | 54 | 361 | 310 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 0 | 33 | 361 | 329 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC82420.1 | 0 | 11 | 361 | 31 | 399 | hypothetical protein OsI_26811 [Oryza sativa Indica Group] |
| RefSeq | NP_200370.1 | 0 | 33 | 361 | 36 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002264297.1 | 0 | 1 | 361 | 1 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298857.1 | 0 | 50 | 361 | 1 | 318 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522727.1 | 0 | 1 | 361 | 24 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 63 | 360 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 9e-37 | 64 | 360 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-16 | 64 | 346 | 34 | 359 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.0000000001 | 75 | 240 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.0000000001 | 75 | 240 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
