| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000149950 |
| Family | GH14 |
| Protein Properties | Length: 520 Molecular Weight: 58204.4 Isoelectric Point: 8.1387 |
| Chromosome | Chromosome/Scaffold: 008113294 Start: 6533 End: 11902 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 133 | 342 | 0 |
| TFQMVQKHGMKIQVVMSFHQCGGNVGDSCSIPLPPWVLEEVSKNPDLVYTDKSGRRNPEYISLGCDSLPVLGGRTPIQVYTDYMRSFHDRFIDYLGDVIV EIQVGMGPCGXLRYPAYPESNGTWRFPGIGEFQCYDKYMRASLEASAEAMGKRDWGRSGPHDSGQYNQFPEDTGFFKRDGTWNTEYGQFFLEWYSGKLLR HGDRILSAAK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 520 Download |
| MTLTLRSSTS FVNLKDHKGL KNSGDSPGTI CFAQTKPSCR LRAKSSMQET RLLHEKNLXT 60 ISDGRRELLH ALPNIAHTST DNKVPVYVML PLDTVXHXGH LNKHECEFDG PEASRGXRSY 120 GGCVVGIGGG GRTFQMVQKH GMKIQVVMSF HQCGGNVGDS CSIPLPPWVL EEVSKNPDLV 180 YTDKSGRRNP EYISLGCDSL PVLGGRTPIQ VYTDYMRSFH DRFIDYLGDV IVEIQVGMGP 240 CGXLRYPAYP ESNGTWRFPG IGEFQCYDKY MRASLEASAE AMGKRDWGRS GPHDSGQYNQ 300 FPEDTGFFKR DGTWNTEYGQ FFLEWYSGKL LRHGDRILSA AKGDEIYGGN XFMVMSWLLQ 360 LECTFIVKQL GFDKKCFRNG GFRRGNLRNP HGFDGSIPLK LRVKGTEFCM EMKKGRMMIH 420 FQVVVRFESL ENRLKNDGKT SGSSESDGGE TGQXDLAHLF SLISPPCYLL WLVPHFSHLP 480 DWAATLSASS FDWAAALPFS SVSSFPRFLS FPPLSHPHVA 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-79 | 84 | 342 | 281 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 3.0e-86 | 87 | 343 | 271 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 6.0e-95 | 82 | 341 | 280 | + beta-amylase | ||
| PLN00197 | PLN00197 | 9.0e-119 | 84 | 342 | 274 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 1 | 349 | 379 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 343 | 1 | 354 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 443 | 1 | 446 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 343 | 1 | 358 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 343 | 1 | 359 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 343 | 1 | 358 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2dqx_A | 0 | 82 | 341 | 10 | 281 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
| PDB | 1ukp_D | 0 | 82 | 341 | 10 | 281 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 82 | 341 | 10 | 281 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 82 | 341 | 10 | 281 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 82 | 341 | 10 | 281 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EB123194 | 209 | 135 | 343 | 0 |
| HO781538 | 344 | 30 | 343 | 0 |
| EH697131 | 287 | 88 | 349 | 0 |
| FQ472301 | 205 | 135 | 339 | 0 |
| DY670877 | 310 | 1 | 278 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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