| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000151647 |
| Family | GT90 |
| Protein Properties | Length: 1247 Molecular Weight: 138579 Isoelectric Point: 6.2596 |
| Chromosome | Chromosome/Scaffold: 013029303 Start: 4534 End: 9977 |
| Description | plastid movement impaired1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT90 | 2 | 100 | 1.6e-25 |
| DREPYAYWKGNPFVADTRKDLTQKCNVSETQDWNAHLFIQDWILESQQGFKQSNVADQCTHXYKIYIEGYAWSVSEKYILACDSVTLLVKPKYYDFFTR | |||
| Full Sequence |
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| Protein Sequence Length: 1247 Download |
| MDREPYAYWK GNPFVADTRK DLTQKCNVSE TQDWNAHLFI QDWILESQQG FKQSNVADQC 60 THXYKIYIEG YAWSVSEKYI LACDSVTLLV KPKYYDFFTR DFGTGISNWN SSKQLHSGGA 120 KDGLCPRISK GATHLCLESM ACPANESPKK SMTESLVKSP SAIDPCTMPP PYEPRALAEV 180 NGNCPPTFIP INSFSHPCRI CAQSLAQCVG FISVRNVIPK YQMGDGGRKP RYYTIIIHAF 240 NLNENPWCLI CMIINHPPHS SPQSMAVSPP QKPNSHVIPL SNFPLPFPLH ASEISSGSRR 300 NSNTQLLEEL EALSESLYTS HTSSTSTRRT ASLVLPRSSV PPIPSKDGVV PPSVEEIRLN 360 NKPRRRMSLS PWRSRPKLTN DEEDEHKDQG KKAVKYNSPE LRSLDDKATA IIERKGIWNW 420 KPVRAISHIG MQKLSCLFSV EVVTAQGLPT SMNGLRLSVC VRKKETKDGA VQTMPSRVTQ 480 GAADFEETLF VRCHVYCSSA HGKKTKFEPR PFWVYLFAVD AEELDFGRST VDLSQMIQES 540 IEKSREGQRI RQWDTSFKLL GKAKGGELAL KLGFQIMEKD GGVGIYSQVE DLKSSKSNNF 600 TSSFGRKQSK TSFSVPSPKL SSRGEAWTPS QARKAVDLQG IDELNLDEPN PVPISSPSSS 660 SAAQKPKEPE VPKVEELDLP DFEVVDKGVE FQDKGKEYGE EQSEKSVGEK SATSSEVVKE 720 IVQDHVHTTR LTELDSIAQQ IKALESLMGK EKIDEKDEED EDIKSQKLEA DEENVTKEFL 780 QMLEEEEILN EYKLNQSDVP PFALEGAEES GEGEAAAVYL PDLGKSLGSV VQTRDGGYLA 840 SMNPFDTLVA RKDTPKLAMQ ISKPFVLPWD QSMSGFELFQ RIAGIGLDEL NSQIMNLMAL 900 DELMDKTAEQ IAFEGIASAI IQGRNKEGAS SSAARTIAAV KTMANTLSTG RKERISTGIW 960 NVNENPLTLE EILAFSMQKI EAMALEALKI QAEMAEEEAP FEVSPTNNSF TNSSGAKVLQ 1020 NHPLASSISL EDWIKNHSLA SSEGLQDENQ PETITLAVIV QLRDPLRRYE AVGGPMIALI 1080 YATRADGAVN EEEKRFRVTS MHVGGLKVRT KGGKRNAWDS ERQRLTAMQW LISYGLAKAG 1140 ARKKGKHHVA SKGQDLLWSI SSRMMANMWL KNITSTTAGP PLGKLLKTYN VVLTLKQGSM 1200 VHCFEQAINL GRIEPTEETS EEIWPSPYCQ VHHMDDDLHM GGIAKTH 1260 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05686 | Glyco_transf_90 | 0.002 | 1 | 20 | 20 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| pfam10358 | NT-C2 | 3.0e-10 | 430 | 546 | 120 | + N-terminal C2 in EEIG1 and EHBP1 proteins. This version of the C2 domain was initally identified in the vertebrate estrogen early-induced gene 1 (EEIG1), and its Drosophila ortholog required for uptake of dsRNA via the endocytotic machinery to induce RNAi silencing. It is also in C.elegans ortholog Sym-3 (SYnthetic lethal with Mec-3) and the mammalian protein EHBP1 (EH domain Binding Protein-1) that regulates endocytotic recycling and two plant proteins, RPG that regulates Rhizobium-directed polar growth and PMI1 (Plastid Movement Impaired 1) that is essential for intracellular movement of chloroplasts in response to blue light. | ||
| pfam05686 | Glyco_transf_90 | 1.0e-11 | 126 | 180 | 55 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| smart00672 | CAP10 | 4.0e-38 | 1 | 100 | 105 | + Putative lipopolysaccharide-modifying enzyme. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_174979.5 | 0 | 296 | 1173 | 6 | 835 | PMI1 (PLASTID MOVEMENT IMPAIRED1) [Arabidopsis thaliana] |
| RefSeq | XP_002273127.1 | 0 | 300 | 1173 | 8 | 850 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300628.1 | 0 | 431 | 1173 | 1 | 721 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307813.1 | 0 | 431 | 1171 | 1 | 720 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510718.1 | 0 | 289 | 1171 | 1 | 854 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796146 | 765 | 418 | 1173 | 0 |
| HO780013 | 434 | 574 | 1004 | 0 |
| BU041598 | 205 | 818 | 1022 | 0 |
| DR945353 | 267 | 818 | 1084 | 0 |
| EE081190 | 261 | 767 | 1027 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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