y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000153096 |
Family | CBM43 |
Protein Properties | Length: 489 Molecular Weight: 52757 Isoelectric Point: 7.4025 |
Chromosome | Chromosome/Scaffold: 020642339 Start: 12975 End: 18274 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 110 | 192 | 9.5e-35 |
WCVASQGASQMALQVALDYACGHGGTDCSEIQPGRSCYNPNSVRDHASYAFNNYYQKKPVPNSCNFGGTAMITSTDPSTGSCQ |
Full Sequence |
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Protein Sequence Length: 489 Download |
MHFENSSLSN LGLSVTIKEK NIGHIKEKDQ ENKGLKFPET LISTTQRDIT TPITTVPTIT 60 TTNPTSSTPI VNPNSNPADS TVPVTSSPSM TPFPTTTTTP SSPASTGSSW CVASQGASQM 120 ALQVALDYAC GHGGTDCSEI QPGRSCYNPN SVRDHASYAF NNYYQKKPVP NSCNFGGTAM 180 ITSTDPSTGS CQYPSTSTSS SVLNTTNTSG STVFGAVPSG PTTSAATVDA NTPSLQNILY 240 IMACLMHWCG GDANKQRQAG GSKAAGTAVV WWIAGNSLVR VEIACRVVQK RRARIGSVQA 300 CSNRSDYGLE YRRWDDTRQA DVYTNHEASK GFNISNVNDA EDSVACRRFD LLYICNDKAS 360 LSSTLAISSN TFFTLTTIIM IIIPRSTPSI MEHAEHALDL AILRGMTRVW IWDGKARAPP 420 ELIDGMVEYA RMVAERSFGH MKSYGTVTST KQPECDKFWW KGKDPEVVAQ FHPTAERGCE 480 GQVARSDGG 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04450 | BSP | 0.0009 | 401 | 472 | 76 | + Peptidase of plants and bacteria. These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens. | ||
pfam07983 | X8 | 4.0e-20 | 110 | 180 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-37 | 110 | 193 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 1.96182e-44 | 44 | 221 | 51 | 219 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 5.04467e-44 | 44 | 221 | 51 | 219 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 0 | 95 | 247 | 63 | 220 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 14 | 245 | 20 | 230 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 1.96182e-44 | 46 | 206 | 35 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-17 | 99 | 197 | 2 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN549719 | 136 | 110 | 245 | 0 |
DT494383 | 139 | 110 | 248 | 1.4013e-45 |
CF236179 | 136 | 110 | 245 | 5.60519e-45 |
BU894548 | 136 | 110 | 245 | 8.40779e-45 |
JG464119 | 118 | 110 | 227 | 1.96182e-44 |
Sequence Alignments (This image is cropped. Click for full image.) |
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