Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000154790 |
Family | GH3 |
Protein Properties | Length: 609 Molecular Weight: 67407.7 Isoelectric Point: 7.0066 |
Chromosome | Chromosome/Scaffold: 022509249 Start: 1702 End: 5475 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 50 | 285 | 1.4013e-45 |
LSSRLGIPMIYRIDAVHGHNNVYNATIFPHNVGLGSTRQDEICHHHLKAALCNCITTTRDPELVRRIGSATALEVRAMGIPYAFAPCIARSKMGQVLRKL QRRSQIVQEMTKIIPGLQGDIPTNSQKGVPYVGGKEDNLDNTFRVXLVMDSINKSNEFSACAKHFVGXGGTSKGINEYNTVVDQQELLSIHMPAYSDSII KGVSTVMISYSSWNGKKMHAYRDLITDFLKGTLKFM |
Full Sequence |
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Protein Sequence Length: 609 Download |
MQIDRSVASV DTTKTYFIGS VLSGGGSAPL PEASAEDWVN MINGFQKGAL SSRLGIPMIY 60 RIDAVHGHNN VYNATIFPHN VGLGSTRQDE ICHHHLKAAL CNCITTTRDP ELVRRIGSAT 120 ALEVRAMGIP YAFAPCIARS KMGQVLRKLQ RRSQIVQEMT KIIPGLQGDI PTNSQKGVPY 180 VGGKEDNLDN TFRVXLVMDS INKSNEFSAC AKHFVGXGGT SKGINEYNTV VDQQELLSIH 240 MPAYSDSIIK GVSTVMISYS SWNGKKMHAY RDLITDFLKG TLKFMVRINY KEFINLINLV 300 QNNVVPMDRI DDAAVRILLV KFTMGLFENP LADFSLVNEL GSQRFGKGGC QKIRRAFEEW 360 EKREHYRSSH TSSQEGTTIL GAIKSAVDSS TEVIYSENPD GNFVKSNNFX YAIVVVGEHP 420 YAETAGDSPN LMMAEPGPSV ISNVCESVKC IVVLITGRPI VIEPYISSID ALVAAWLPGS 480 EGQGITDVLF GDXGFSGKLP RTWFRTVDQL PMNVGDSHYD PLFPFGFGLE TESVKELVTR 540 TSFVAGIPFY WTLVHIIKLD GKEKEMKFTR ELGPVVASXF QSIITTYCFK AFICCGVIXN 600 EELGYLYRY |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 2.0e-14 | 451 | 529 | 101 | + beta-D-glucoside glucohydrolase; Provisional | ||
PRK15098 | PRK15098 | 7.0e-15 | 42 | 330 | 331 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-28 | 52 | 333 | 323 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-33 | 36 | 318 | 335 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-36 | 368 | 529 | 180 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 2 | 537 | 55 | 626 | unknown [Populus trichocarpa] |
EMBL | CBI24995.1 | 0 | 1 | 557 | 11 | 608 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_680141.2 | 0 | 1 | 542 | 58 | 634 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 1 | 557 | 56 | 647 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 1 | 542 | 54 | 631 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 2 | 536 | 34 | 604 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1iex_A | 0 | 2 | 536 | 34 | 604 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1iew_A | 0 | 2 | 536 | 34 | 604 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1iev_A | 0 | 2 | 536 | 34 | 604 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1ieq_A | 0 | 2 | 536 | 34 | 604 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 468 | 19 | 409 | 0 |
FN998758 | 369 | 16 | 343 | 0 |
FN998446 | 362 | 16 | 336 | 0 |
FN998735 | 358 | 16 | 332 | 0 |
FN998511 | 358 | 16 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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