| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000155009 |
| Family | GH33 |
| Protein Properties | Length: 434 Molecular Weight: 48938.2 Isoelectric Point: 6.1922 |
| Chromosome | Chromosome/Scaffold: 02732418 Start: 17348 End: 21808 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH33 | 146 | 394 | 2e-24 |
| ADEQLDTPMWNPVLFKLPSEELLLFYKIGPEVQKWSGCMKRSYDKGVTWTEREQLPPGILGPIKNKPILLENGNLLCGSSVESWNSWGAWVEVVTETQLH RVVATDSVRLWRKYGPIYVENETLSVIQPVPYQTATGTLRLLMRSFDQIGRVCVAESNDGGQNWNHAIPTELPNPNSGIDGVKLRDGFILLAYNTVSRGV LKVALSNDDGDSWRDAVTLEETLGMEFSYPAVIQASDESIHITYTYNRT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 434 Download |
| MWKSVGSVVL LVLLSFFLVL VFSVLNVFDL LHPRTPFSFN STLASHAQHH LLHYFPIRKL 60 DRIFAETATT APATPNVSMR KDCYLEGPVL EEYTFPAHSA PFNSCHASTI VEVVQEKLYF 120 KEKKLIKITS WLPISENGYW QSPVVADEQL DTPMWNPVLF KLPSEELLLF YKIGPEVQKW 180 SGCMKRSYDK GVTWTEREQL PPGILGPIKN KPILLENGNL LCGSSVESWN SWGAWVEVVT 240 ETQLHRVVAT DSVRLWRKYG PIYVENETLS VIQPVPYQTA TGTLRLLMRS FDQIGRVCVA 300 ESNDGGQNWN HAIPTELPNP NSGIDGVKLR DGFILLAYNT VSRGVLKVAL SNDDGDSWRD 360 AVTLEETLGM EFSYPAVIQA SDESIHITYT YNRTQIKRLA SVLLEKLGSL LEFPSDVAEK 420 APVLSEKIIW NKPT |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.002 | 154 | 364 | 243 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 2.0e-17 | 101 | 407 | 357 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 1.0e-72 | 140 | 387 | 261 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18568.1 | 0 | 77 | 399 | 32 | 349 | unknown [Glycine max] |
| RefSeq | NP_001078763.1 | 0 | 89 | 399 | 20 | 325 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263578.1 | 0 | 1 | 399 | 1 | 364 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 79 | 399 | 1 | 316 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 79 | 397 | 1 | 314 | conserved hypothetical protein [Ricinus communis] |
