y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000156321 |
Family | GH3 |
Protein Properties | Length: 200 Molecular Weight: 22457.1 Isoelectric Point: 4.4903 |
Chromosome | Chromosome/Scaffold: 000886324 Start: 5888 End: 6694 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 9 | 180 | 0 |
LTYWSPNVNVVRDPRWGRATETPGEDPYVVGVYASNYVRGLQDVEGTENATDLNSRPLEVSSCCKHYAAYDVDNWLGVDHYHFDARVTEQDMAETFLKPF EMCIKDGDVSSVMCSYNRVNGIPTCADPKLLTHTIRGEYIVADCDSLEVMVDHHKWLSDTNEDAAAQALKAG |
Full Sequence |
---|
Protein Sequence Length: 200 Download |
MYNLGRAGLT YWSPNVNVVR DPRWGRATET PGEDPYVVGV YASNYVRGLQ DVEGTENATD 60 LNSRPLEVSS CCKHYAAYDV DNWLGVDHYH FDARVTEQDM AETFLKPFEM CIKDGDVSSV 120 MCSYNRVNGI PTCADPKLLT HTIRGEYIVA DCDSLEVMVD HHKWLSDTNE DAAAQALKAG 180 QYSLQNLLTE PFLFGKYLLA 240 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 9.0e-18 | 12 | 180 | 175 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 9.0e-30 | 12 | 180 | 180 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-40 | 11 | 180 | 177 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 7.0e-65 | 1 | 180 | 185 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265788.1 | 0 | 1 | 180 | 124 | 308 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274591.1 | 0 | 1 | 180 | 166 | 350 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 181 | 170 | 355 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 1 | 165 | 89 | 258 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 1 | 180 | 167 | 351 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 2e-19 | 12 | 180 | 128 | 287 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u48_A | 2e-19 | 12 | 180 | 128 | 287 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_B | 6e-19 | 12 | 180 | 128 | 287 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_A | 6e-19 | 12 | 180 | 128 | 287 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ac0_D | 0.0000000000003 | 14 | 147 | 101 | 216 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CO528615 | 185 | 1 | 180 | 0 |
CO522120 | 182 | 1 | 177 | 0 |
JG601118 | 198 | 1 | 193 | 0 |
CO125376 | 198 | 1 | 193 | 0 |
EX934682 | 185 | 1 | 180 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|