y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000167387 |
Family | GT90 |
Protein Properties | Length: 1001 Molecular Weight: 114149 Isoelectric Point: 6.8852 |
Chromosome | Chromosome/Scaffold: 005401169 Start: 4755 End: 12869 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT90 | 684 | 925 | 0 |
RVPDVDIMFDCMDKPIINRTEHESMPLPLFRYCTDGDHFDIPFPDWSFWGWPELNIHPWEEQFGEIKRGSQERSWKKKEPFAYWKGNPDVSSPIRTELLN CNDTKMWRAQIMRQDWEAEARAGYEHSKLSTQCNHQYKIYAEGYAWSVSLKYIVSCGSLTLIITPQYEDFFSRGLIPKINYWPISPNAICPSIKSAVDWA QGHQSEAKAMGQRGQDFMESLSMDRVYDYMFHLIMEYSKLLD |
Full Sequence |
---|
Protein Sequence Length: 1001 Download |
MEPKHDFLVS FAASSPPPLL PQWMLPPKTP ITQNQIEEKI NPFHHLLLLR HRAHGWKKKK 60 VTDVQMGTIL MSSSGREEAS EVKDDIWSAL AVLVTFWFFA SMTMILGFYG SDNLQLGPNC 120 SRLIQTNPFF VQSIKVINRI SSCNSCLVKN WCAVKLIWSI KQQAQEHDEQ KLGPVLYGFN 180 KPPPLDVEIA WTETQHTLAW IYFLNKGSGL DITYRVKPTS SSPLTLVIAQ GSESLAEWIE 240 DPSYGSGRIQ QEIPESSTYY IAVGNLNPEN VEVELVFNIK SILYNTTEAY YKCSLYXRXC 300 SLKLSLLGAN VAVITSPGPK EGIPNDDWYV SLSYGPRWAM YFLVAGVMTL LLLTAFIFYN 360 KFQNSSEDTT XFQAEEGQSV QTPLLSPKDD DTLSWGSSYE FISNEEDLDE CLAVSSLEGS 420 LTNEGDSNXT GRLCVICFDG PRDCFFLPCG HCAACFTCXT RIAEEAGTCP ICRRRMKKLQ 480 IYKAISSSRS TAXHPPPPHP IMAAPRSAAP SHILPSVIAL SLLSLGFVIY KVSNAASFFP 540 VDDFATQTKT LAGHNLQPTP WHFFPPKTFT DETLHDRAYK LIHCSYLACR YKSNEVPERR 600 RPPSFRAKAP KCPEFFXWIH HDLEPWARTR ISAAHLETAK QHAAFRVVIV DGRLYVDLFW 660 ACVQSRAMFT IWGFLQLLAR YPGRVPDVDI MFDCMDKPII NRTEHESMPL PLFRYCTDGD 720 HFDIPFPDWS FWGWPELNIH PWEEQFGEIK RGSQERSWKK KEPFAYWKGN PDVSSPIRTE 780 LLNCNDTKMW RAQIMRQDWE AEARAGYEHS KLSTQCNHQY KIYAEGYAWS VSLKYIVSCG 840 SLTLIITPQY EDFFSRGLIP KINYWPISPN AICPSIKSAV DWAQGHQSEA KAMGQRGQDF 900 MESLSMDRVY DYMFHLIMEY SKLLDFEPDI PASAMEVCTE SLLCLADPKQ REWLKRSTAY 960 PSPSPPCTLP SADSNLIKRW KRKKQETMDA VEDMNPKGRR R 1020 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13923 | zf-C3HC4_2 | 7.0e-9 | 433 | 474 | 43 | + Zinc finger, C3HC4 type (RING finger). | ||
pfam13920 | zf-C3HC4_3 | 3.0e-13 | 432 | 474 | 43 | + Zinc finger, C3HC4 type (RING finger). | ||
pfam05686 | Glyco_transf_90 | 8.0e-25 | 889 | 994 | 109 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 2.0e-75 | 608 | 775 | 171 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 4.0e-94 | 684 | 927 | 257 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD94602.1 | 0 | 500 | 994 | 10 | 497 | hypothetical protein [Arabidopsis thaliana] |
EMBL | CAN70836.1 | 0 | 113 | 969 | 119 | 922 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_172202.1 | 0 | 500 | 994 | 10 | 497 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002279069.1 | 0 | 113 | 969 | 119 | 995 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525649.1 | 0 | 505 | 995 | 6 | 487 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2yho_G | 0.0002 | 433 | 480 | 20 | 63 | B Chain B, The Idol-Ube2d Complex Mediates Sterol-Dependent Degradation Of The Ldl Receptor |
PDB | 2yho_E | 0.0002 | 433 | 480 | 20 | 63 | B Chain B, The Idol-Ube2d Complex Mediates Sterol-Dependent Degradation Of The Ldl Receptor |
PDB | 2yho_C | 0.0002 | 433 | 480 | 20 | 63 | B Chain B, The Idol-Ube2d Complex Mediates Sterol-Dependent Degradation Of The Ldl Receptor |
PDB | 2yho_A | 0.0002 | 433 | 480 | 20 | 63 | B Chain B, The Idol-Ube2d Complex Mediates Sterol-Dependent Degradation Of The Ldl Receptor |
PDB | 2yhn_B | 0.0002 | 433 | 480 | 20 | 63 | A Chain A, The Idol-Ube2d Complex Mediates Sterol-Dependent Degradation Of The Ldl Receptor |