| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000168682 |
| Family | CE8 |
| Protein Properties | Length: 611 Molecular Weight: 66861.6 Isoelectric Point: 6.7149 |
| Chromosome | Chromosome/Scaffold: 004699467 Start: 7234 End: 10414 |
| Description | pectin methylesterase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 278 | 596 | 0 |
| IVVAKDGTGDFKTIQEAVDTVPKKSKNRILIHVKQGVYYENVLMDKSKWNVMMFGDGKTKTVVSGNLSFVDGTPTFSTATFARKETIDIETKSPFKIDDI DKAKLGHAVTGKGFIVKDMGFFNTAGAIKHQAVAFRSGSDLSVYYRCLFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQNCNIQPRQPMANQF NTITAQGKKDPNQNTGISIQKCRLSALDSNLTAQTYLGRPWKDYSTTVIMQSDIRSFLNPLGWKEWVTNVDPPNTIFYAEYQNSGPGSGVDQRVKWAGYN PTLTDDEAAKFTVTSLIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 611 Download |
| MDSVKSFKGY GKVDELEEQA FKRKTRKRLI ILSVSTVVLL AVIIGVVAGV IIHKRNNSSS 60 SVPNSTPGPE LTPAASLKAV CGVTQYPSSC FSSISALETS NSTDPEVIFK LSLQVAIHAA 120 AKLPGXPAKI GLNIANDTHL EKVLDVCEGL FEDVVDRLND SLTSMDVNQG DKLLSAAKIN 180 DIKTWLSTTL TDQETCLDSL ADLNSTLVQE FKAAMQNTTE FSSNSLAIVA KILSLLTNLN 240 VPVHRRLLGV GGSEVDFPGW ISPGDRRLLQ DNNATAQIVV AKDGTGDFKT IQEAVDTVPK 300 KSKNRILIHV KQGVYYENVL MDKSKWNVMM FGDGKTKTVV SGNLSFVDGT PTFSTATFAR 360 KETIDIETKS PFKIDDIDKA KLGHAVTGKG FIVKDMGFFN TAGAIKHQAV AFRSGSDLSV 420 YYRCLFDGFQ DTLYAHSNRQ FYRECDITGT IDFIFGNAAV VFQNCNIQPR QPMANQFNTI 480 TAQGKKDPNQ NTGISIQKCR LSALDSNLTA QTYLGRPWKD YSTTVIMQSD IRSFLNPLGW 540 KEWVTNVDPP NTIFYAEYQN SGPGSGVDQR VKWAGYNPTL TDDEAAKFTV TSLIQGGEWL 600 PATDVAFETT L 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 1.0e-149 | 133 | 611 | 494 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 3.0e-153 | 73 | 607 | 545 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-179 | 278 | 596 | 324 | + Pectinesterase. | ||
| PLN02314 | PLN02314 | 0 | 1 | 611 | 618 | + pectinesterase | ||
| PLN02468 | PLN02468 | 0 | 7 | 611 | 612 | + putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_175787.1 | 0 | 1 | 605 | 1 | 581 | ATPME1; pectinesterase [Arabidopsis thaliana] |
| Swiss-Prot | Q43111 | 0 | 1 | 611 | 1 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
| RefSeq | XP_002265217.1 | 0 | 1 | 611 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304256.1 | 0 | 1 | 611 | 1 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532945.1 | 0 | 1 | 611 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 278 | 611 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 276 | 607 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 6e-17 | 288 | 601 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 6e-17 | 288 | 601 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-16 | 288 | 601 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
